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BC028777 Gene Detail
Summary
  • Symbol
    BC028777
  • Name
    cDNA sequence BC028777
  • Synonyms
    5430411J08Rik
Location &
Maps
more
  • Sequence Map
    Chr17:24427835-24440704 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 12.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    393 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3642753
 lncRNA gene Chr17:24427835-24440704 (+)
129S1/SvImJ ENSMUSG00200039028
 lncRNA gene Chr17:19860282-19873166 (+)
A/J ENSMUSG00195054451
 lncRNA gene Chr17:20879094-20891978 (+)
AKR/J ENSMUSG00220028032
 lncRNA gene Chr17:19937974-19950842 (+)
BALB/cJ ENSMUSG00180052013
 lncRNA gene Chr17:20161939-20174790 (+)
C3H/HeJ ENSMUSG00175044768
 lncRNA gene Chr17:19915648-19928533 (+)
C57BL/6NJ ENSMUSG00215044050
 lncRNA gene Chr17:19935777-19948646 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013473
 unclassified non-coding RNA gene Chr17:20019397-20032396 (+)
CAST/EiJ ENSTCUG00005051170
 lncRNA gene Chr17:20505959-20518818 (+)
CBA/J ENSMUSG00210043382
 lncRNA gene Chr17:19754487-19767373 (+)
DBA/2J ENSMUSG00185054198
 lncRNA gene Chr17:21967449-21980333 (+)
FVB/NJ ENSMUSG00205037559
 lncRNA gene Chr17:20229142-20242004 (+)
JF1/MsJ ENSUMUG00000058047
 lncRNA gene Chr17:21427593-21440462 (+)
LP/J ENSMUSG00230055104
 lncRNA gene Chr17:23364953-23377837 (+)
NOD/ShiLtJ ENSMUSG00190040138
 lncRNA gene Chr17:19856187-19869071 (+)
NZO/HlLtJ ENSMUSG00225054620
 lncRNA gene Chr17:25286575-25299459 (+)
PWK/PhJ ENSLUMG00010020637
 lncRNA gene Chr17:19339228-19352309 (+)
SPRET/EiJ ENSMSPG00010049749
 lncRNA gene Chr17:20672968-20686418 (+)
WSB/EiJ ENSIUOG00005051751
 lncRNA gene Chr17:20614583-20627443 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085185 Ensembl Gene Model | MGI Sequence Detail 12870 C57BL/6J ±  kb
transcript ENSMUST00000137883 Ensembl | MGI Sequence Detail 1017 Not Applicable  
polypeptide Q8CEP4 UniProt | EBI | MGI Sequence Detail 110 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Phenotypes 3
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory