Gm9826 Pseudogene Detail

Summary

• Symbol
  Gm9826
• Name
  predicted gene 9826
• Synonyms
  EG545302

• Feature Type
  pseudogene
• IDs
  MGI:3642725
  NCBI Gene: 545302
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:7247963-7249261 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 2.08 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642725	pseudogene	Chr1:7247899-7249977 (+)
129S1/SvImJ	ENSMUSG00200003299	pseudogene	Chr1:4645088-4646386 (+)
A/J	ENSMUSG00195003229	pseudogene	Chr1:4457850-4459148 (+)
AKR/J	ENSMUSG00220003922	pseudogene	Chr1:4522905-4524203 (+)
BALB/cJ	ENSMUSG00180009532	pseudogene	Chr1:4535200-4536498 (+)
C3H/HeJ	ENSMUSG00175000309	pseudogene	Chr1:4401584-4402882 (+)
C57BL/6NJ	ENSMUSG00215004336	pseudogene	Chr1:4438755-4440053 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210002062	pseudogene	Chr1:4316608-4317906 (+)
DBA/2J	ENSMUSG00185004778	pseudogene	Chr1:5333652-5334950 (+)
FVB/NJ	ENSMUSG00205005430	pseudogene	Chr1:4600245-4601543 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230002484	pseudogene	Chr1:5352208-5353506 (+)
NOD/ShiLtJ	ENSMUSG00190001334	pseudogene	Chr1:4462648-4463946 (+)
NZO/HlLtJ	ENSMUSG00225000241	pseudogene	Chr1:8732384-8733682 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005011604	pseudogene	Chr1:4430993-4432291 (+)

Homology

• Gene Tree
  Gm9826
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000048538 (Evidence)
• NCBI Gene
  545302

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000048538	Ensembl Gene Model | MGI Sequence Detail	1299	C57BL/6J
transcript	ENSMUST00000029124	Ensembl | MGI Sequence Detail	1299	Not Applicable

Other
Accession IDs

MGI:3644177

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm9826:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5888	Chr1:7247895-7247903 (+)	-64 bp