Gm10385 Gene Detail

Summary

• Symbol
  Gm10385
• Name
  predicted gene 10385

• Feature Type
  lncRNA gene
• IDs
  MGI:3642705
  NCBI Gene: 100038592
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:36690271-36706633 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  707 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642705	lncRNA gene	Chr15:36690271-36706633 (+)
129S1/SvImJ	ENSMUSG00200028021	lncRNA gene	Chr15:33700423-33705222 (+)
A/J	ENSMUSG00195036529	lncRNA gene	Chr15:33628900-33633748 (+)
AKR/J	ENSMUSG00220028943	lncRNA gene	Chr15:33542851-33547697 (+)
BALB/cJ	ENSMUSG00180032906	lncRNA gene	Chr15:33591073-33595919 (+)
C3H/HeJ	ENSMUSG00175028563	lncRNA gene	Chr15:33795375-33800221 (+)
C57BL/6NJ	ENSMUSG00215023940	lncRNA gene	Chr15:33603223-33608069 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011321	lncRNA gene	Chr15:33631680-33636533 (+)
CBA/J	ENSMUSG00210018167	lncRNA gene	Chr15:33709821-33714667 (+)
DBA/2J	ENSMUSG00185035966	lncRNA gene	Chr15:33690662-33695508 (+)
FVB/NJ	ENSMUSG00205035604	lncRNA gene	Chr15:33600437-33605283 (+)
JF1/MsJ	ENSUMUG00000035195	lncRNA gene	Chr15:33576625-33581424 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190032983	lncRNA gene	Chr15:33671939-33676785 (+)
NZO/HlLtJ	ENSMUSG00225032159	lncRNA gene	Chr15:37382160-37387006 (+)
PWK/PhJ	ENSLUMG00010033033	lncRNA gene	Chr15:33752083-33756934 (+)
SPRET/EiJ	ENSMSPG00010013262	lncRNA gene	Chr15:34387343-34392292 (+)
WSB/EiJ	ENSIUOG00005032640	lncRNA gene	Chr15:33712395-33717245 (+)

Homology

• Gene Tree
  Gm10385
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm10385
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• UniProt
  1

• Ensembl
  ENSMUSG00000115834 (Evidence)
• NCBI Gene
  100038592

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115834	Ensembl Gene Model | MGI Sequence Detail	16363	C57BL/6J
transcript	ENSMUST00000226323	Ensembl | MGI Sequence Detail	3929	Not Applicable
polypeptide	Q3UMZ1	UniProt | EBI | MGI Sequence Detail	57	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 5
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6