Rpl19-ps1 Pseudogene Detail

Summary

• Symbol
  Rpl19-ps1
• Name
  ribosomal protein L19, pseudogene 1
• Synonyms
  ENSMUSG00000064281, Gm15424

• Feature Type
  pseudogene
• IDs
  MGI:3642668
  NCBI Gene: 100039695
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:84989835-84990425 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 43.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  12 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642668	pseudogene	Chr1:84989807-84990508 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195035591	pseudogene	Chr1:82085210-82085800 (+)
AKR/J	ENSMUSG00220045193	pseudogene	Chr1:81668381-81668971 (-)
BALB/cJ	ENSMUSG00180017435	pseudogene	Chr1:82341660-82342250 (+)
C3H/HeJ	ENSMUSG00175001697	pseudogene	Chr1:82502064-82502654 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0012502	pseudogene	ChrX:265806-266393 (+)
CAST/EiJ	ENSTCUG00005007473	pseudogene	Chr1:82037344-82037934 (+)
CAST/EiJ	ENSTCUG00005047510	pseudogene	Chr1:172157716-172158306 (-)
CBA/J	ENSMUSG00210012496	pseudogene	Chr1:82206353-82206943 (-)
DBA/2J	ENSMUSG00185016715	pseudogene	Chr1:83296163-83296753 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000023205	pseudogene	Chr1:83180320-83180907 (+)
JF1/MsJ	ENSUMUG00000023235	pseudogene	Chr1:83468712-83469299 (+)
LP/J	ENSMUSG00230021496	pseudogene	Chr1:83233703-83234293 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225004445	pseudogene	Chr1:86477511-86478101 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl19-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Rpl19-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000064281 (Evidence)
• NCBI Gene
  100039695

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000064281	Ensembl Gene Model | MGI Sequence Detail	591	C57BL/6J
transcript	ENSMUST00000121059	Ensembl | MGI Sequence Detail	591	Not Applicable

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45

TSS for Rpl19-ps1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7657	Chr1:84989799-84989806 (+)	-32 bp