Gm9916 Gene Detail

Summary

• Symbol
  Gm9916
• Name
  predicted gene 9916

• Feature Type
  lncRNA gene
• IDs
  MGI:3642633
  NCBI Gene: 791377
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:118228419-118229646 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 51.71 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642633	lncRNA gene	Chr3:118228419-118229646 (+)
129S1/SvImJ	ENSMUSG00200027216	lncRNA gene	Chr3:114920709-114921936 (+)
A/J	ENSMUSG00195017526	lncRNA gene	Chr3:115147993-115149220 (+)
AKR/J	ENSMUSG00220026201	lncRNA gene	Chr3:113541374-113542601 (+)
BALB/cJ	ENSMUSG00180031403	lncRNA gene	Chr3:115091944-115093171 (+)
C3H/HeJ	ENSMUSG00175028279	lncRNA gene	Chr3:114632694-114633921 (+)
C57BL/6NJ	ENSMUSG00215007718	lncRNA gene	Chr3:115355426-115356653 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005716	lincRNA gene	Chr3:112070191-112071423 (+)
CAST/EiJ	ENSTCUG00005034288	lncRNA gene	Chr3:115620930-115622139 (+)
CBA/J	ENSMUSG00210003128	lncRNA gene	Chr3:115255721-115256948 (+)
DBA/2J	ENSMUSG00185007728	lncRNA gene	Chr3:115837739-115838966 (+)
FVB/NJ	ENSMUSG00205008511	lncRNA gene	Chr3:114209478-114210705 (+)
JF1/MsJ	ENSUMUG00000004208	lncRNA gene	Chr3:114733004-114734225 (+)
LP/J	ENSMUSG00230012144	lncRNA gene	Chr3:117767815-117769042 (+)
NOD/ShiLtJ	ENSMUSG00190037345	lncRNA gene	Chr3:116223605-116224832 (+)
NZO/HlLtJ	ENSMUSG00225003802	lncRNA gene	Chr3:120261986-120263213 (+)
PWK/PhJ	ENSLUMG00010009733	lncRNA gene	Chr3:114599716-114600943 (+)
SPRET/EiJ	ENSMSPG00010033453	lncRNA gene	Chr3:115276728-115277958 (+)
WSB/EiJ	ENSIUOG00005007042	lncRNA gene	Chr3:115417857-115417932 (+)

Homology

• Gene Tree
  Gm9916
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9916
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000104178 (Evidence)
• NCBI Gene
  791377

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104178	Ensembl Gene Model | MGI Sequence Detail	1228	C57BL/6J
transcript	ENSMUST00000192943	Ensembl | MGI Sequence Detail	1228	Not Applicable
polypeptide	Q8BQ83	UniProt | EBI | MGI Sequence Detail	101	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 11

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426