A130051J06Rik Gene Detail

Summary

• Symbol
  A130051J06Rik
• Name
  RIKEN cDNA A130051J0 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3642574
  NCBI Gene: 791370
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:95685770-95702360 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 50.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  589 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642574	lncRNA gene	Chr15:95678204-95702360 (-)
129S1/SvImJ	ENSMUSG00200052087	lncRNA gene	Chr15:92882587-92886030 (-)
A/J	ENSMUSG00195047533	lncRNA gene	Chr15:92736507-92739950 (-)
AKR/J	ENSMUSG00220050786	lncRNA gene	Chr15:92741668-92745113 (-)
BALB/cJ	ENSMUSG00180048458	lncRNA gene	Chr15:92656937-92660723 (-)
C3H/HeJ	ENSMUSG00175048069	lncRNA gene	Chr15:92920566-92924011 (-)
C57BL/6NJ	ENSMUSG00215051828	lncRNA gene	Chr15:92719869-92723655 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020201	protein coding gene	Chr15:89522399-89526210 (-)
CAST/EiJ	ENSTCUG00005048589	lncRNA gene	Chr15:92206902-92210348 (-)
CBA/J	ENSMUSG00210032582	lncRNA gene	Chr15:92701683-92705128 (-)
DBA/2J	ENSMUSG00185041915	lncRNA gene	Chr15:92748201-92751644 (-)
FVB/NJ	ENSMUSG00205048311	lncRNA gene	Chr15:92460615-92464058 (-)
JF1/MsJ	ENSUMUG00000057049	lncRNA gene	Chr15:92233690-92237128 (-)
LP/J	ENSMUSG00230041969	lncRNA gene	Chr15:96062309-96065752 (-)
NOD/ShiLtJ	ENSMUSG00190050124	lncRNA gene	Chr15:92754754-92758540 (-)
NZO/HlLtJ	ENSMUSG00225044394	lncRNA gene	Chr15:96365656-96369099 (-)
PWK/PhJ	ENSLUMG00010049272	lncRNA gene	Chr15:92400048-92403491 (-)
SPRET/EiJ	ENSMSPG00010049669	lncRNA gene	Chr15:94222597-94226373 (-)
WSB/EiJ	ENSIUOG00005042682	lncRNA gene	Chr15:92809325-92812769 (-)

Homology

• Gene Tree
  A130051J06Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  18 phenotype references
  

• All Mutations and Alleles
  9
• Gene trapped
  8
• Radiation induced
  1
• Genomic Mutations
  1 involving A130051J06Rik
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  42
• RefSeq
  6
• UniProt
  1

• Ensembl
  ENSMUSG00000097643 (Evidence)
• NCBI Gene
  791370

Representative Sequences			Length	Strain/Species
genomic	791370	NCBI Gene Model | MGI Sequence Detail	16591	C57BL/6J
transcript	AK037810	GenBank | ENA | DDBJ | MGI Sequence Detail	2620	C57BL/6J
polypeptide	Q8CAU1	UniProt | EBI | MGI Sequence Detail	227	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 27

  Phenotypes 18
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:387680 Ahn B, et al., Disorganization of Transcriptional Regulation and Alteration of Keratin Family Gene Expression in Hairy Ear Mice. Genes (Basel). 2026 Jan 31;17(2)