Gm10465 Gene Detail

Summary

• Symbol
  Gm10465
• Name
  predicted gene 10465

• Feature Type
  lncRNA gene
• IDs
  MGI:3642554
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:54559207-54563865 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 23.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  277 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642554	lncRNA gene	Chr12:54559207-54563865 (-)
129S1/SvImJ	ENSMUSG00200031525	lncRNA gene	Chr12:46542773-46547433 (-)
A/J	ENSMUSG00195018913	lncRNA gene	Chr12:49112789-49117483 (-)
AKR/J	ENSMUSG00220027490	lncRNA gene	Chr12:47161146-47165814 (-)
BALB/cJ	ENSMUSG00180006169	lncRNA gene	Chr12:48104328-48109014 (-)
C3H/HeJ	ENSMUSG00175011836	lncRNA gene	Chr12:51174931-51179621 (-)
C57BL/6NJ	ENSMUSG00215018511	lncRNA gene	Chr12:47476971-47481629 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009175	lncRNA gene	Chr12:47607002-47611635 (-)
CBA/J	ENSMUSG00210010105	lncRNA gene	Chr12:47649235-47653921 (-)
DBA/2J	ENSMUSG00185015252	lncRNA gene	Chr12:49594710-49599374 (-)
FVB/NJ	ENSMUSG00205013920	lncRNA gene	Chr12:47440554-47445217 (-)
JF1/MsJ	ENSUMUG00000008954	lncRNA gene	Chr12:53727958-53732611 (-)
LP/J	ENSMUSG00230016950	lncRNA gene	Chr12:56619825-56624485 (-)
NOD/ShiLtJ	ENSMUSG00190016792	lncRNA gene	Chr12:46630741-46635431 (-)
NZO/HlLtJ	ENSMUSG00225041254	lncRNA gene	Chr12:58763778-58768436 (-)
PWK/PhJ	ENSLUMG00010016516	lncRNA gene	Chr12:47783888-47788555 (-)
SPRET/EiJ	ENSMSPG00010016509	lncRNA gene	Chr12:49155167-49159760 (-)
WSB/EiJ	ENSIUOG00005003833	lncRNA gene	Chr12:47487053-47491664 (-)

Homology

• Gene Tree
  Gm10465
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113947 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113947	Ensembl Gene Model | MGI Sequence Detail	4659	C57BL/6J
transcript	ENSMUST00000223133	Ensembl | MGI Sequence Detail	3334	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;