Gm9996 Gene Detail

Summary

• Symbol
  Gm9996
• Name
  predicted gene 9996

• Feature Type
  protein coding gene
• IDs
  MGI:3642549
  NCBI Gene: 791368
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:29019278-29020190 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 16.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642549	protein coding gene	Chr10:29019278-29020190 (-)
129S1/SvImJ	ENSMUSG00200009759	unclassified gene	Chr10:25862044-25862956 (-)
A/J	ENSMUSG00195014282	unclassified gene	Chr10:26143910-26144822 (-)
AKR/J	ENSMUSG00220011479	unclassified gene	Chr10:25833508-25834422 (-)
BALB/cJ	ENSMUSG00180018400	unclassified gene	Chr10:26269016-26269928 (-)
C3H/HeJ	ENSMUSG00175025658	unclassified gene	Chr10:25999929-26000843 (-)
C57BL/6NJ	ENSMUSG00215013940	unclassified gene	Chr10:25817199-25818111 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015205	protein coding gene	Chr10:25031960-25032874 (-)
CAST/EiJ	ENSTCUG00005014149	unclassified gene	Chr10:25634994-25635908 (-)
CBA/J	ENSMUSG00210023590	unclassified gene	Chr10:25946615-25947529 (-)
DBA/2J	ENSMUSG00185007754	unclassified gene	Chr10:26099307-26100221 (-)
FVB/NJ	ENSMUSG00205010222	unclassified gene	Chr10:26085540-26086454 (-)
JF1/MsJ	ENSUMUG00000018324	unclassified gene	Chr10:25899799-25900709 (-)
LP/J	ENSMUSG00230012096	unclassified gene	Chr10:27872489-27873401 (-)
NOD/ShiLtJ	ENSMUSG00190015364	unclassified gene	Chr10:26209605-26210517 (-)
NZO/HlLtJ	ENSMUSG00225034414	unclassified gene	Chr10:32131396-32132308 (-)
PWK/PhJ	ENSLUMG00010010313	unclassified gene	Chr10:25771757-25772670 (-)
SPRET/EiJ	ENSMSPG00010015856	unclassified gene	Chr10:26689481-26690392 (-)
WSB/EiJ	ENSIUOG00005032794	unclassified gene	Chr10:25568315-25569229 (-)

Homology

• Gene Tree
  Gm9996
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9996
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000056316 (Evidence)
• NCBI Gene
  791368

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000056316	Ensembl Gene Model | MGI Sequence Detail	913	C57BL/6J
transcript	AK029414	GenBank | ENA | DDBJ | MGI Sequence Detail	914	C57BL/6J
polypeptide	Q8CDX6	UniProt | EBI | MGI Sequence Detail	112	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87