Gm15443 Pseudogene Detail

Summary

• Symbol
  Gm15443
• Name
  predicted gene 15443
• Synonyms
  ENSMUSG00000073547

• Feature Type
  pseudogene
• IDs
  MGI:3642525
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:148900970-148901789 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642525	pseudogene	Chr1:148900970-148901789 (-)
129S1/SvImJ	ENSMUSG00200002727	pseudogene	Chr1:146337713-146338532 (-)
A/J	ENSMUSG00195014815	pseudogene	Chr1:145699152-145699971 (-)
AKR/J	ENSMUSG00220005868	pseudogene	Chr1:145457556-145458375 (-)
BALB/cJ	ENSMUSG00180032908	pseudogene	Chr1:145917873-145918692 (-)
C3H/HeJ	ENSMUSG00175002924	pseudogene	Chr1:145951079-145951898 (-)
C57BL/6NJ	ENSMUSG00215003705	pseudogene	Chr1:145856589-145857408 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005006203	pseudogene	Chr1:144458449-144459268 (-)
CBA/J	ENSMUSG00210035273	pseudogene	Chr1:145848165-145848984 (-)
DBA/2J	ENSMUSG00185007168	pseudogene	Chr1:150132545-150133364 (-)
FVB/NJ	ENSMUSG00205033304	pseudogene	Chr1:145026724-145027543 (-)
JF1/MsJ	ENSUMUG00000012105	pseudogene	Chr1:149270666-149271485 (-)
LP/J	ENSMUSG00230000565	pseudogene	Chr1:149645417-149646236 (-)
NOD/ShiLtJ	ENSMUSG00190012713	pseudogene	Chr1:145686392-145687211 (-)
NZO/HlLtJ	ENSMUSG00225006624	pseudogene	Chr1:153396294-153397113 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005024560	pseudogene	Chr1:145252954-145253773 (-)

Homology

• Gene Tree
  Gm15443
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm15443
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000082588 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082588	Ensembl Gene Model | MGI Sequence Detail	820	C57BL/6J
transcript	ENSMUST00000118947	Ensembl | MGI Sequence Detail	820	Not Applicable

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;