Rpl36a-ps3 Pseudogene Detail

Summary

• Symbol
  Rpl36a-ps3
• Name
  ribosomal protein L36A, pseudogene 3
• Synonyms
  Gm10316

• Feature Type
  pseudogene
• IDs
  MGI:3642503
  NCBI Gene: 100043893
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:136465805-136466125 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 66.59 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  183 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642503	pseudogene	Chr6:136465733-136466198 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195008738	pseudogene	Chr6:132835476-132835796 (+)
AKR/J	ENSMUSG00220041906	pseudogene	Chr6:131063582-131063902 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175037052	pseudogene	Chr6:132855687-132856007 (+)
C57BL/6NJ	ENSMUSG00215026934	pseudogene	Chr6:133101711-133102031 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210005601	pseudogene	Chr6:132908012-132908332 (+)
DBA/2J	ENSMUSG00185023596	pseudogene	Chr6:133570294-133570614 (+)
FVB/NJ	ENSMUSG00205042431	pseudogene	Chr6:132063136-132063453 (+)
JF1/MsJ	ENSUMUG00000045806	pseudogene	Chr6:132281979-132282299 (+)
JF1/MsJ	ENSUMUG00000050380	pseudogene	Chr1:55690918-55691238 (-)
JF1/MsJ	ENSUMUG00000006159	pseudogene	Chr3:21849651-21849971 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190006932	pseudogene	Chr6:133408512-133408832 (+)
NZO/HlLtJ	ENSMUSG00225007608	pseudogene	Chr6:137610744-137611064 (+)
PWK/PhJ	ENSLUMG00010042975	pseudogene	Chr6:131365115-131365435 (+)
PWK/PhJ	ENSLUMG00010027157	pseudogene	Chr1:55224916-55225236 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl36a-ps3
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000071141 (Evidence)
• NCBI Gene
  100043893

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000071141	Ensembl Gene Model | MGI Sequence Detail	321	C57BL/6J
transcript	ENSMUST00000120093	Ensembl | MGI Sequence Detail	321	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Rpl36a-ps3:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr59313	Chr6:136465731-136465767 (+)	-56 bp