C130032M10Rik Gene Detail

Summary

• Symbol
  C130032M10Rik
• Name
  RIKEN cDNA C130032M10 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3642482
  NCBI Gene: 791362
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr9:114344739-114345669 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642482	lncRNA gene	Chr9:114344739-114345669 (+)
129S1/SvImJ	ENSMUSG00200031036	lncRNA gene	Chr9:111447338-111448242 (+)
A/J	ENSMUSG00195044620	lncRNA gene	Chr9:110646488-110647392 (+)
AKR/J	ENSMUSG00220031171	lncRNA gene	Chr9:111109553-111110457 (+)
BALB/cJ	ENSMUSG00180036934	lncRNA gene	Chr9:111184189-111185093 (+)
C3H/HeJ	ENSMUSG00175019175	lncRNA gene	Chr9:111405238-111406142 (+)
C57BL/6NJ	ENSMUSG00215037170	lncRNA gene	Chr9:111289755-111290659 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032772	protein coding gene	Chr9:109973538-109974269 (+)
CAST/EiJ	ENSTCUG00005036159	lncRNA gene	Chr9:111065067-111065972 (+)
CBA/J	ENSMUSG00210046247	lncRNA gene	Chr9:111132186-111133090 (+)
DBA/2J	ENSMUSG00185017510	lncRNA gene	Chr9:111468934-111469838 (+)
FVB/NJ	ENSMUSG00205050133	lncRNA gene	Chr9:111306904-111307808 (+)
JF1/MsJ	ENSUMUG00000055459	lncRNA gene	Chr9:111293304-111294208 (+)
LP/J	ENSMUSG00230050400	lncRNA gene	Chr9:111576096-111577000 (+)
NOD/ShiLtJ	ENSMUSG00190051186	lncRNA gene	Chr9:111062073-111062977 (+)
NZO/HlLtJ	ENSMUSG00225024156	lncRNA gene	Chr9:111857644-111858548 (+)
PWK/PhJ	ENSLUMG00010039554	lncRNA gene	Chr9:111243234-111244138 (+)
SPRET/EiJ	ENSMSPG00010024541	lncRNA gene	Chr9:112903965-112904869 (+)
WSB/EiJ	ENSIUOG00005048492	lncRNA gene	Chr9:110521742-110522646 (+)

Homology

• Gene Tree
  C130032M10Rik
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• UniProt
  1

• Ensembl
  ENSMUSG00000097821 (Evidence)
• NCBI Gene
  791362

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097821	Ensembl Gene Model | MGI Sequence Detail	931	C57BL/6J
transcript	ENSMUST00000238379	Ensembl | MGI Sequence Detail	931	Not Applicable
polypeptide	Q8C888	UniProt | EBI | MGI Sequence Detail	123	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 8
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for C130032M10Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr87567	Chr9:114344781-114344818 (+)	61 bp