Gm9913 Gene Detail

Summary

• Symbol
  Gm9913
• Name
  predicted gene 9913

• Feature Type
  lncRNA gene
• IDs
  MGI:3642395
  NCBI Gene: 100036535
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:125347009-125349801 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 61.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642395	lncRNA gene	Chr2:125347009-125349801 (+)
129S1/SvImJ	ENSMUSG00200048860	lncRNA gene	Chr2:122391601-122394393 (+)
A/J	ENSMUSG00195032381	lncRNA gene	Chr2:122422731-122425523 (+)
AKR/J	ENSMUSG00220046048	lncRNA gene	Chr2:122180711-122183503 (+)
BALB/cJ	ENSMUSG00180050239	lncRNA gene	Chr2:122209706-122212498 (+)
C3H/HeJ	ENSMUSG00175047796	lncRNA gene	Chr2:122702017-122704794 (+)
C57BL/6NJ	ENSMUSG00215034346	lncRNA gene	Chr2:122267543-122270334 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0024227	protein coding gene	Chr2:118240728-118243558 (+)
CAST/EiJ	ENSTCUG00005017190	lncRNA gene	Chr2:121567864-121570654 (+)
CBA/J	ENSMUSG00210038197	lncRNA gene	Chr2:122550526-122553303 (+)
DBA/2J	ENSMUSG00185037249	lncRNA gene	Chr2:122204619-122207396 (+)
FVB/NJ	ENSMUSG00205044689	lncRNA gene	Chr2:121420071-121422863 (+)
JF1/MsJ	ENSUMUG00000031085	lncRNA gene	Chr2:122069906-122072693 (+)
LP/J	ENSMUSG00230039696	lncRNA gene	Chr2:124030095-124032887 (+)
NOD/ShiLtJ	ENSMUSG00190015716	lncRNA gene	Chr2:122382826-122385603 (+)
NZO/HlLtJ	ENSMUSG00225004559	lncRNA gene	Chr2:131936238-131939030 (+)
PWK/PhJ	ENSLUMG00010048677	lncRNA gene	Chr2:121971783-121974568 (+)
SPRET/EiJ	ENSMSPG00010034486	lncRNA gene	Chr2:124427808-124430594 (+)
WSB/EiJ	ENSIUOG00005044053	lncRNA gene	Chr2:122198908-122201700 (+)

Homology

• Gene Tree
  Gm9913
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9913
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000053615 (Evidence)
• NCBI Gene
  100036535

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000053615	Ensembl Gene Model | MGI Sequence Detail	2793	C57BL/6J
transcript	ENSMUST00000066157	Ensembl | MGI Sequence Detail	2793	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17