Tmem147os Gene Detail

Summary

• Symbol
  Tmem147os
• Name
  transmembrane protein 147, opposite strand
• Synonyms
  C630016N16Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3642392
  NCBI Gene: 791088
• Alliance
  gene page
• Transcription Start Sites
  4 TSS

Location &
Maps

• Sequence Map
  Chr7:30429004-30445354 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 19.23 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  200 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642392	antisense lncRNA gene	Chr7:30429004-30455551 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004433	antisense lncRNA gene	Chr7:29738442-29758868 (+)
A/J	MGP_AJ_G0004412	antisense lncRNA gene	Chr7:28928820-28946840 (+)
AKR/J	MGP_AKRJ_G0004394	antisense lncRNA gene	Chr7:29670291-29689585 (+)
BALB/cJ	MGP_BALBcJ_G0004397	antisense lncRNA gene	Chr7:29115741-29138379 (+)
C3H/HeJ	MGP_C3HHeJ_G0004347	antisense lncRNA gene	Chr7:30127113-30150757 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004547	antisense lncRNA gene	Chr7:30706054-30736820 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004003	antisense lncRNA gene	Chr7:29951581-29967888 (+)
CAST/EiJ	MGP_CASTEiJ_G0004307	antisense lncRNA gene	Chr7:23381554-23400095 (+)
CBA/J	MGP_CBAJ_G0004341	antisense lncRNA gene	Chr7:32155035-32174132 (+)
DBA/2J	MGP_DBA2J_G0004355	antisense lncRNA gene	Chr7:28656890-28673513 (+)
FVB/NJ	MGP_FVBNJ_G0004373	antisense lncRNA gene	Chr7:28797006-28813883 (+)
LP/J	MGP_LPJ_G0004436	antisense lncRNA gene	Chr7:30051141-30074673 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004364	antisense lncRNA gene	Chr7:31395455-31426289 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004545	antisense lncRNA gene	Chr7:29172977-29193685 (+)
PWK/PhJ	MGP_PWKPhJ_G0004260	antisense lncRNA gene	Chr7:23698231-23722438 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004201	antisense lncRNA gene	Chr7:20182329-20204115 (+)
WSB/EiJ	MGP_WSBEiJ_G0004346	antisense lncRNA gene	Chr7:29576714-29598671 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  1 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  6

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• UniProt
  1

• Ensembl
  ENSMUSG00000097320 (Evidence), ENSMUSG00000109224 (Evidence)
• NCBI Gene
  791088

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097320	Ensembl Gene Model | MGI Sequence Detail	16351	C57BL/6J
transcript	ENSMUST00000180820	Ensembl | MGI Sequence Detail	1276	Not Applicable
polypeptide	Q8C7L5	UniProt | EBI | MGI Sequence Detail	109	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 13

  Phenotypes 3
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81

TSS for Tmem147os:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr65802	Chr7:30428988-30429068 (+)	24 bp
Tssr65803	Chr7:30429134-30429184 (+)	155 bp
Tssr65804	Chr7:30429220-30429231 (+)	222 bp
Tssr65805	Chr7:30430599-30430602 (+)	1,597 bp