Gm9898 Gene Detail

Summary

• Symbol
  Gm9898
• Name
  predicted gene 9898

• Feature Type
  lncRNA gene
• IDs
  MGI:3642391
  NCBI Gene: 791350
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:30672635-30794780 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 11.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2527 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642391	lncRNA gene	Chr1:30672635-30794780 (-)
129S1/SvImJ	ENSMUSG00200001079	lncRNA gene	Chr1:28248340-28249743 (-)
A/J	ENSMUSG00195000082	lncRNA gene	Chr1:27977775-27979178 (-)
AKR/J	ENSMUSG00220000629	lncRNA gene	Chr1:27965783-27967185 (-)
BALB/cJ	ENSMUSG00180001128	lncRNA gene	Chr1:28061700-28063102 (-)
C3H/HeJ	ENSMUSG00175000747	lncRNA gene	Chr1:27977826-27979229 (-)
C57BL/6NJ	ENSMUSG00215001083	lncRNA gene	Chr1:28045283-28046685 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004336	lincRNA gene	Chr1:25682618-25684024 (-)
CAST/EiJ	ENSTCUG00005000509	lncRNA gene	Chr1:28099689-28101091 (-)
CBA/J	ENSMUSG00210010949	lncRNA gene	Chr1:27837399-27838802 (-)
DBA/2J	ENSMUSG00185016812	lncRNA gene	Chr1:28897075-28898478 (-)
FVB/NJ	ENSMUSG00205007002	lncRNA gene	Chr1:27976899-27978302 (-)
JF1/MsJ	ENSUMUG00000000320	lncRNA gene	Chr1:28054394-28055795 (-)
LP/J	ENSMUSG00230000581	lncRNA gene	Chr1:28918749-28920152 (-)
NOD/ShiLtJ	ENSMUSG00190000087	lncRNA gene	Chr1:27970849-27972252 (-)
NZO/HlLtJ	ENSMUSG00225014672	lncRNA gene	Chr1:32192300-32193703 (-)
PWK/PhJ	ENSLUMG00010000253	lncRNA gene	Chr1:27676170-27677571 (-)
SPRET/EiJ	ENSMSPG00010000897	lncRNA gene	Chr1:28878156-28879564 (-)
WSB/EiJ	ENSIUOG00005001992	lncRNA gene	Chr1:27955804-27957206 (-)

Homology

• Gene Tree
  Gm9898
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9898
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000053185 (Evidence)
• NCBI Gene
  791350

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000053185	Ensembl Gene Model | MGI Sequence Detail	122146	C57BL/6J
transcript	ENSMUST00000369084	Ensembl | MGI Sequence Detail	1204	Not Applicable
polypeptide	Q8C325	UniProt | EBI | MGI Sequence Detail	103	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 13

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;