Gm10156 Pseudogene Detail

Summary

• Symbol
  Gm10156
• Name
  predicted gene 10156
• Synonyms
  EG626661

• Feature Type
  pseudogene
• IDs
  MGI:3642344
  NCBI Gene: 626661
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:107462246-107462707 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 57.21 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642344	pseudogene	Chr7:107462172-107463189 (+)
129S1/SvImJ	ENSMUSG00200034936	pseudogene	Chr7:93985513-93985974 (+)
A/J	ENSMUSG00195054754	pseudogene	Chr7:98500086-98500547 (+)
AKR/J	ENSMUSG00220040250	pseudogene	Chr7:91878497-91878958 (+)
BALB/cJ	ENSMUSG00180046346	pseudogene	Chr7:95174639-95175100 (+)
C3H/HeJ	ENSMUSG00175051948	pseudogene	Chr7:95810721-95811182 (+)
C57BL/6NJ	ENSMUSG00215051401	pseudogene	Chr7:95106351-95106812 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053225	pseudogene	Chr7:98493365-98493826 (+)
CBA/J	ENSMUSG00210048582	pseudogene	Chr7:95636286-95636747 (+)
DBA/2J	ENSMUSG00185057039	pseudogene	Chr7:99988065-99988526 (+)
FVB/NJ	ENSMUSG00205048304	pseudogene	Chr7:95568050-95568511 (+)
JF1/MsJ	ENSUMUG00000051806	pseudogene	Chr7:105006920-105007381 (+)
LP/J	ENSMUSG00230048743	pseudogene	Chr7:106089664-106090125 (+)
NOD/ShiLtJ	ENSMUSG00190047634	pseudogene	Chr7:95813625-95814086 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043006	pseudogene	Chr7:94156669-94157130 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005049894	pseudogene	Chr7:96443262-96443723 (+)

Homology

• Gene Tree
  Gm10156
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm10156
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000066245 (Evidence)
• NCBI Gene
  626661

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066245	Ensembl Gene Model | MGI Sequence Detail	462	C57BL/6J
transcript	ENSMUST00000122364	Ensembl | MGI Sequence Detail	462	Not Applicable

Other
Accession IDs

MGI:3645622

References

• Summaries
  All 15

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67

TSS for Gm10156:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr68454	Chr7:107462167-107462174 (+)	-75 bp