Gm9791 Pseudogene Detail

Summary

• Symbol
  Gm9791
• Name
  predicted pseudogene 9791

• Feature Type
  pseudogene
• IDs
  MGI:3642317
  NCBI Gene: 100040232
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:34059166-34059612 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 16.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642317	pseudogene	Chr3:34058921-34059660 (-)
129S1/SvImJ	ENSMUSG00200006479	pseudogene	Chr3:30791877-30792323 (-)
A/J	ENSMUSG00195001461	pseudogene	Chr3:30794072-30794518 (-)
AKR/J	ENSMUSG00220000927	pseudogene	Chr3:30827942-30828388 (-)
BALB/cJ	ENSMUSG00180002897	pseudogene	Chr3:30910593-30911039 (-)
C3H/HeJ	ENSMUSG00175003672	pseudogene	Chr3:30824414-30824860 (-)
C57BL/6NJ	ENSMUSG00215001623	pseudogene	Chr3:31184640-31185086 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010062	pseudogene	Chr16:5214811-5218185 (-)
CAST/EiJ	ENSTCUG00005025700	pseudogene	Chr3:30678623-30679069 (-)
CBA/J	ENSMUSG00210002106	pseudogene	Chr3:30872689-30873135 (-)
DBA/2J	ENSMUSG00185001462	pseudogene	Chr3:31113942-31114388 (-)
FVB/NJ	ENSMUSG00205009252	pseudogene	Chr3:30286997-30287443 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230024233	pseudogene	Chr3:33034905-33035351 (-)
NOD/ShiLtJ	ENSMUSG00190001950	pseudogene	Chr3:31100756-31101202 (-)
NZO/HlLtJ	ENSMUSG00225007145	pseudogene	Chr3:35652889-35653335 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005013992	pseudogene	Chr3:31107012-31107458 (-)

Homology

• Gene Tree
  Gm9791
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm9791
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000044434 (Evidence)
• NCBI Gene
  100040232

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000044434	Ensembl Gene Model | MGI Sequence Detail	447	C57BL/6J
transcript	ENSMUST00000060997	Ensembl | MGI Sequence Detail	447	Not Applicable

References

• Summaries
  All 7

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm9791:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr32967	Chr3:34059639-34059663 (-)	-39 bp