Gm10097 Gene Detail

Summary

• Symbol
  Gm10097
• Name
  predicted gene 10097

• Feature Type
  lncRNA gene
• IDs
  MGI:3642295
  NCBI Gene: 791342
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:5019192-5021975 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 2.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642295	lncRNA gene	Chr10:5019192-5021975 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0016983	protein coding gene	Chr10:2130853-2133636 (+)
A/J	MGP_AJ_G0016961	protein coding gene	Chr10:2000021-2002804 (+)
AKR/J	MGP_AKRJ_G0016926	protein coding gene	Chr10:2004332-2007115 (+)
BALB/cJ	MGP_BALBcJ_G0016919	protein coding gene	Chr10:1965317-1968100 (+)
C3H/HeJ	MGP_C3HHeJ_G0016744	protein coding gene	Chr10:2104366-2107149 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0017382	protein coding gene	Chr10:2156091-2158874 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0015088	protein coding gene	Chr10:1788530-1793031 (+)
CAST/EiJ	MGP_CASTEiJ_G0016326	protein coding gene	Chr10:2159777-2162628 (+)
CBA/J	MGP_CBAJ_G0016716	protein coding gene	Chr10:2231187-2233970 (+)
DBA/2J	MGP_DBA2J_G0016824	protein coding gene	Chr10:1990378-1993161 (+)
FVB/NJ	MGP_FVBNJ_G0016819	protein coding gene	Chr10:1942097-1944880 (+)
LP/J	MGP_LPJ_G0016899	protein coding gene	Chr10:2053426-2056209 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0016850	protein coding gene	Chr10:2134801-2137584 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0017419	protein coding gene	Chr10:2023205-2025988 (+)
PWK/PhJ	MGP_PWKPhJ_G0016112	protein coding gene	Chr10:2000575-2003395 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0015893	protein coding gene	Chr10:2234679-2237880 (+)
WSB/EiJ	MGP_WSBEiJ_G0016387	protein coding gene	Chr10:2090177-2092960 (+)

Homology

• Gene Tree
  Gm10097
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• UniProt
  1

• Ensembl
  ENSMUSG00000096553 (Evidence)
• NCBI Gene
  791342

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096553	Ensembl Gene Model | MGI Sequence Detail	2784	C57BL/6J
transcript	ENSMUST00000180100	Ensembl | MGI Sequence Detail	2784	Not Applicable
polypeptide	Q8C8X3	UniProt | EBI | MGI Sequence Detail	106	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;