Gm10154 Pseudogene Detail

Summary

• Symbol
  Gm10154
• Name
  predicted gene 10154

• Feature Type
  pseudogene
• IDs
  MGI:3642271
  NCBI Gene: 100040611
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:83423422-83423775 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 39.46 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642271	pseudogene	Chr4:83423380-83423808 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	ENSMUSG00220008186	pseudogene	Chr4:78353339-78353692 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175004101	pseudogene	Chr4:78830695-78831048 (-)
C57BL/6NJ	ENSMUSG00215002373	pseudogene	Chr4:78787763-78788116 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210001298	pseudogene	Chr4:78424585-78424938 (-)
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205001511	pseudogene	Chr4:77297875-77298228 (-)
JF1/MsJ	ENSUMUG00000032205	pseudogene	Chr4:79299304-79299657 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190000947	pseudogene	Chr4:77872880-77873233 (-)
NZO/HlLtJ	ENSMUSG00225005647	pseudogene	Chr4:87540716-87541069 (-)
PWK/PhJ	ENSLUMG00010036973	pseudogene	Chr11:46579497-46579850 (+)
PWK/PhJ	ENSLUMG00010001718	pseudogene	Chr4:77131457-77131810 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005010051	pseudogene	Chr4:78217378-78217731 (-)

Homology

• Gene Tree
  Gm10154
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm10154
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000066116 (Evidence)
• NCBI Gene
  100040611

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000066116	Ensembl Gene Model | MGI Sequence Detail	354	C57BL/6J
transcript	ENSMUST00000084445	Ensembl | MGI Sequence Detail	354	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;