Gm10777 Gene Detail

Summary

• Symbol
  Gm10777
• Name
  predicted gene 10777

• Feature Type
  lncRNA gene
• IDs
  MGI:3642231
  NCBI Gene: 102635133
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:81850307-81853064 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642231	lncRNA gene	Chr10:81832751-81854655 (+)
129S1/SvImJ	ENSMUSG00200050765	unclassified gene	Chr10:78267036-78269793 (+)
A/J	ENSMUSG00195050624	unclassified gene	Chr10:78713389-78716146 (+)
AKR/J	ENSMUSG00220049932	unclassified gene	Chr10:78311061-78313818 (+)
BALB/cJ	ENSMUSG00180053435	unclassified gene	Chr10:78723792-78726549 (+)
C3H/HeJ	ENSMUSG00175052809	unclassified gene	Chr10:78594555-78597312 (+)
C57BL/6NJ	ENSMUSG00215053154	unclassified gene	Chr10:78336477-78339234 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005052129	unclassified gene	Chr10:78086324-78089070 (+)
CBA/J	ENSMUSG00210050287	unclassified gene	Chr10:78450575-78453332 (+)
DBA/2J	ENSMUSG00185054000	unclassified gene	Chr10:78660122-78662879 (+)
FVB/NJ	ENSMUSG00205052153	unclassified gene	Chr10:78377566-78380323 (+)
JF1/MsJ	ENSUMUG00000056059	unclassified gene	Chr10:80049090-80051814 (+)
LP/J	ENSMUSG00230018774	unclassified gene	Chr10:80562583-80565340 (+)
NOD/ShiLtJ	ENSMUSG00190052691	unclassified gene	Chr10:78706647-78709404 (+)
NZO/HlLtJ	ENSMUSG00225052916	unclassified gene	Chr10:84849078-84851835 (+)
PWK/PhJ	ENSLUMG00010051832	unclassified gene	Chr10:78377295-78380017 (+)
SPRET/EiJ	ENSMSPG00010048282	unclassified gene	Chr10:79863927-79866654 (+)
WSB/EiJ	ENSIUOG00005051340	unclassified gene	Chr10:78445080-78447840 (+)

Homology

• Gene Tree
  Gm10777
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm10777
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  4
• UniProt
  1

• Ensembl
  ENSMUSG00000112790 (Evidence)
• NCBI Gene
  102635133

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112790	Ensembl Gene Model | MGI Sequence Detail	2758	C57BL/6J
transcript	AK041588	GenBank | ENA | DDBJ | MGI Sequence Detail	1560	C57BL/6J
polypeptide	Q3T9Y6	UniProt | EBI | MGI Sequence Detail	54	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

Other
Accession IDs

MGI:5592537

References

• Summaries
  All 12

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87