Gm10832 Gene Detail

Summary

• Symbol
  Gm10832
• Name
  predicted gene 10832

• Feature Type
  lncRNA gene
• IDs
  MGI:3642210
  NCBI Gene: 100038543
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:10849820-10854284 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  273 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642210	lncRNA gene	Chr16:10849696-10855936 (+)
129S1/SvImJ	ENSMUSG00200011885	lncRNA gene	Chr16:7855364-7859827 (+)
A/J	ENSMUSG00195011890	lncRNA gene	Chr16:7393463-7397929 (+)
AKR/J	ENSMUSG00220017529	lncRNA gene	Chr16:7682266-7686736 (+)
BALB/cJ	ENSMUSG00180008772	lncRNA gene	Chr16:7632670-7637132 (+)
C3H/HeJ	ENSMUSG00175030567	lncRNA gene	Chr16:7824036-7828505 (+)
C57BL/6NJ	ENSMUSG00215023802	lncRNA gene	Chr16:7499340-7503812 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032401	lncRNA gene	Chr16:7757304-7761800 (+)
CBA/J	ENSMUSG00210012228	lncRNA gene	Chr16:7841190-7845659 (+)
DBA/2J	ENSMUSG00185010248	lncRNA gene	Chr16:7786532-7791005 (+)
FVB/NJ	ENSMUSG00205014223	lncRNA gene	Chr16:7702671-7707155 (+)
JF1/MsJ	ENSUMUG00000037611	lncRNA gene	Chr16:7903666-7908144 (+)
LP/J	ENSMUSG00230046749	lncRNA gene	Chr16:10351132-10355595 (+)
NOD/ShiLtJ	ENSMUSG00190027425	lncRNA gene	Chr16:7884859-7889327 (+)
NZO/HlLtJ	ENSMUSG00225032428	lncRNA gene	Chr16:13569168-13573640 (+)
PWK/PhJ	ENSLUMG00010018012	lncRNA gene	Chr16:7756346-7760846 (+)
SPRET/EiJ	ENSMSPG00010017855	lncRNA gene	Chr16:7725735-7730205 (+)
WSB/EiJ	ENSIUOG00005016938	lncRNA gene	Chr16:7850329-7854828 (+)

Homology

• Gene Tree
  Gm10832
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000115992 (Evidence)
• NCBI Gene
  100038543

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115992	Ensembl Gene Model | MGI Sequence Detail	4465	C57BL/6J
transcript	ENSMUST00000229764	Ensembl | MGI Sequence Detail	701	Not Applicable
polypeptide	Q3UW52	UniProt | EBI | MGI Sequence Detail	109	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm10832:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr137071	Chr16:10849964-10850003 (+)	164 bp