A230060F14Rik Gene Detail

Summary

• Symbol
  A230060F14Rik
• Name
  RIKEN cDNA A230060F14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3642156
  NCBI Gene: 791330
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:85856305-85858193 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3642156	lncRNA gene	Chr10:85856305-85858193 (-)
129S1/SvImJ	ENSMUSG00200031492	lncRNA gene	Chr10:82353259-82355147 (-)
A/J	ENSMUSG00195023250	lncRNA gene	Chr10:82800476-82802364 (-)
AKR/J	ENSMUSG00220022185	lncRNA gene	Chr10:82402777-82404665 (-)
BALB/cJ	ENSMUSG00180034164	lncRNA gene	Chr10:82803593-82805481 (-)
C3H/HeJ	ENSMUSG00175023746	lncRNA gene	Chr10:82679422-82681310 (-)
C57BL/6NJ	ENSMUSG00215031750	lncRNA gene	Chr10:82347907-82349795 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002536	antisense lncRNA gene	Chr10:79901538-79903374 (-)
CAST/EiJ	ENSTCUG00005036876	lncRNA gene	Chr10:82100077-82101954 (-)
CBA/J	ENSMUSG00210036118	lncRNA gene	Chr10:82530172-82532060 (-)
DBA/2J	ENSMUSG00185042808	lncRNA gene	Chr10:82744268-82746156 (-)
FVB/NJ	ENSMUSG00205018777	lncRNA gene	Chr10:82407303-82409191 (-)
JF1/MsJ	ENSUMUG00000023031	lncRNA gene	Chr10:84102940-84104817 (-)
LP/J	ENSMUSG00230018480	lncRNA gene	Chr10:84637018-84638906 (-)
NOD/ShiLtJ	ENSMUSG00190018879	lncRNA gene	Chr10:82786117-82788005 (-)
NZO/HlLtJ	ENSMUSG00225053762	lncRNA gene	Chr10:88909380-88911268 (-)
PWK/PhJ	ENSLUMG00010023226	lncRNA gene	Chr10:82383864-82384409 (-)
SPRET/EiJ	ENSMSPG00010035491	lncRNA gene	Chr10:83843998-83845861 (-)
WSB/EiJ	ENSIUOG00005037096	lncRNA gene	Chr10:82484293-82486181 (-)

Homology

• Gene Tree
  A230060F14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving A230060F14Rik
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• UniProt
  1

• Ensembl
  ENSMUSG00000097692 (Evidence)
• NCBI Gene
  791330

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097692	Ensembl Gene Model | MGI Sequence Detail	1889	C57BL/6J
transcript	ENSMUST00000190739	Ensembl | MGI Sequence Detail	1889	Not Applicable
polypeptide	Q8CAH3	UniProt | EBI | MGI Sequence Detail	182	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

References

• Summaries
  All 15

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87