Gm10747 Gene Detail

Summary

• Symbol
  Gm10747
• Name
  predicted gene 10747

• Feature Type
  lncRNA gene
• IDs
  MGI:3641810
  NCBI Gene: 100038610
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:116878093-116880590 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 65.06 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641810	lncRNA gene	Chr10:116878093-116881013 (+)
129S1/SvImJ	ENSMUSG00200028120	lncRNA gene	Chr10:113289897-113291252 (+)
A/J	ENSMUSG00195023573	lncRNA gene	Chr10:113724649-113726008 (+)
AKR/J	ENSMUSG00220014904	lncRNA gene	Chr10:113298267-113299622 (+)
BALB/cJ	ENSMUSG00180017391	lncRNA gene	Chr10:113741578-113742937 (+)
C3H/HeJ	ENSMUSG00175026468	lncRNA gene	Chr10:113686827-113688185 (+)
C57BL/6NJ	ENSMUSG00215015901	lncRNA gene	Chr10:113382876-113384229 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035192	lncRNA gene	Chr10:112707537-112708547 (+)
CBA/J	ENSMUSG00210021516	lncRNA gene	Chr10:113536408-113537766 (+)
DBA/2J	ENSMUSG00185009682	lncRNA gene	Chr10:113660950-113662307 (+)
FVB/NJ	ENSMUSG00205029273	lncRNA gene	Chr10:112985542-112986898 (+)
JF1/MsJ	ENSUMUG00000020354	lncRNA gene	Chr10:114978817-114980174 (+)
LP/J	ENSMUSG00230026759	lncRNA gene	Chr10:115610713-115612071 (+)
NOD/ShiLtJ	ENSMUSG00190018077	lncRNA gene	Chr10:113786111-113787468 (+)
NZO/HlLtJ	ENSMUSG00225018618	lncRNA gene	Chr10:119864772-119866127 (+)
PWK/PhJ	ENSLUMG00010013255	lncRNA gene	Chr10:113364182-113365544 (+)
SPRET/EiJ	ENSMSPG00010016238	lncRNA gene	Chr10:115305988-115307047 (+)
WSB/EiJ	ENSIUOG00005014346	lncRNA gene	Chr10:113379885-113381243 (+)

Homology

• Gene Tree
  Gm10747
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000112242 (Evidence)
• NCBI Gene
  100038610

Representative Sequences			Length	Strain/Species
genomic	100038610	NCBI Gene Model | MGI Sequence Detail	2498	C57BL/6J
transcript	AK145303	GenBank | ENA | DDBJ | MGI Sequence Detail	1016	Not Specified
polypeptide	Q3ULU2	UniProt | EBI | MGI Sequence Detail	102	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9