Gm9934 Gene Detail

Summary

• Symbol
  Gm9934
• Name
  predicted gene 9934

• Feature Type
  lncRNA gene
• IDs
  MGI:3641747
  NCBI Gene: 100036533
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:92701289-92730234 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 51.66 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  980 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641747	lncRNA gene	Chr7:92701289-92730234 (-)
129S1/SvImJ	ENSMUSG00200028697	lncRNA gene	Chr7:79481628-79511538 (-)
A/J	ENSMUSG00195039390	lncRNA gene	Chr7:83995962-84025900 (-)
AKR/J	ENSMUSG00220043464	lncRNA gene	Chr7:77461992-77491947 (-)
BALB/cJ	ENSMUSG00180040888	lncRNA gene	Chr7:80664297-80694258 (-)
C3H/HeJ	ENSMUSG00175025242	lncRNA gene	Chr7:81364410-81394264 (-)
C57BL/6NJ	ENSMUSG00215028467	lncRNA gene	Chr7:80541509-80571663 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006588	lincRNA gene	Chr7:95994685-96021629 (-)
CAST/EiJ	ENSTCUG00005032417	lncRNA gene	Chr7:83959271-83989830 (-)
CBA/J	ENSMUSG00210025435	lncRNA gene	Chr7:81206247-81236103 (-)
DBA/2J	ENSMUSG00185033246	lncRNA gene	Chr7:85536028-85565900 (-)
FVB/NJ	ENSMUSG00205039165	lncRNA gene	Chr7:81164869-81194766 (-)
JF1/MsJ	ENSUMUG00000020707	lncRNA gene	Chr7:90477831-90515728 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190022997	lncRNA gene	Chr7:81415412-81445369 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010039964	lncRNA gene	Chr7:79686841-79724389 (-)
SPRET/EiJ	ENSMSPG00010013364	lncRNA gene	Chr7:80798740-80826568 (-)
WSB/EiJ	ENSIUOG00005010911	lncRNA gene	Chr7:81849465-81879660 (-)

Homology

• Gene Tree
  Gm9934
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm9934
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000054061 (Evidence)
• NCBI Gene
  100036533

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000054061	Ensembl Gene Model | MGI Sequence Detail	28946	C57BL/6J
transcript	ENSMUST00000098303	Ensembl | MGI Sequence Detail	2076	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 14

  Phenotypes 9
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67