Gm10857 Gene Detail

Summary

• Symbol
  Gm10857
• Name
  predicted gene 10857

• Feature Type
  lncRNA gene
• IDs
  MGI:3641733
  NCBI Gene: 100038358
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:6137680-6145379 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 3.62 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  369 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641733	lncRNA gene	Chr2:6137680-6145381 (+)
129S1/SvImJ	ENSMUSG00200033426	lncRNA gene	Chr2:2998272-3005618 (+)
A/J	ENSMUSG00195018260	lncRNA gene	Chr2:3116963-3124662 (+)
AKR/J	ENSMUSG00220006531	lncRNA gene	Chr2:3108432-3116133 (+)
BALB/cJ	ENSMUSG00180032791	lncRNA gene	Chr2:3210177-3217509 (+)
C3H/HeJ	ENSMUSG00175018407	lncRNA gene	Chr2:3098980-3106326 (+)
C57BL/6NJ	ENSMUSG00215024813	lncRNA gene	Chr2:3231540-3239241 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005324	lincRNA gene	Chr2:2926626-2934010 (+)
CAST/EiJ	ENSTCUG00005005114	lncRNA gene	Chr2:3092810-3100178 (+)
CBA/J	ENSMUSG00210028271	lncRNA gene	Chr2:3139288-3146634 (+)
DBA/2J	ENSMUSG00185013090	lncRNA gene	Chr2:3098813-3106155 (+)
FVB/NJ	ENSMUSG00205034418	lncRNA gene	Chr2:3080696-3088018 (+)
JF1/MsJ	ENSUMUG00000004346	lncRNA gene	Chr2:3079660-3087133 (+)
LP/J	ENSMUSG00230003486	lncRNA gene	Chr2:5046187-5053533 (+)
NOD/ShiLtJ	ENSMUSG00190006326	lncRNA gene	Chr2:3105994-3113693 (+)
NZO/HlLtJ	ENSMUSG00225002564	lncRNA gene	Chr2:12782947-12790640 (+)
PWK/PhJ	ENSLUMG00010032865	lncRNA gene	Chr2:3135957-3143333 (+)
SPRET/EiJ	ENSMSPG00010028425	lncRNA gene	Chr2:3126302-3133426 (+)
WSB/EiJ	ENSIUOG00005025163	lncRNA gene	Chr2:3116905-3124206 (+)

Homology

• Gene Tree
  Gm10857
  

Expression

• Assay Results
  597
• cDNA Data
  13

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000102887 (Evidence)
• NCBI Gene
  100038358

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102887	Ensembl Gene Model | MGI Sequence Detail	7700	C57BL/6J
transcript	ENSMUST00000195343	Ensembl | MGI Sequence Detail	2794	Not Applicable
polypeptide	Q3UT62	UniProt | EBI | MGI Sequence Detail	88	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 13

  cDNA 13

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:2139157

References

• Summaries
  All 13
• Earliest
  J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49