Gm9945 Gene Detail

Summary

• Symbol
  Gm9945
• Name
  predicted gene 9945

• Feature Type
  protein coding gene
• IDs
  MGI:3641652
  NCBI Gene: 791266
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:53370993-53371924 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 31.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  77 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641652	protein coding gene	Chr11:53370993-53371924 (+)
129S1/SvImJ	ENSMUSG00200040502	unclassified gene	Chr11:50366838-50367765 (+)
A/J	ENSMUSG00195038547	unclassified gene	Chr11:50304092-50305021 (+)
AKR/J	ENSMUSG00220040576	unclassified gene	Chr11:50492964-50493895 (+)
BALB/cJ	ENSMUSG00180038335	unclassified gene	Chr11:50365526-50366459 (+)
C3H/HeJ	ENSMUSG00175038200	unclassified gene	Chr11:50335380-50336309 (+)
C57BL/6NJ	ENSMUSG00215038228	unclassified gene	Chr11:50158181-50159110 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0016339	protein coding gene	Chr11:48423927-48424838 (+)
CAST/EiJ	ENSTCUG00005044266	unclassified gene	Chr11:49928782-49929737 (+)
CBA/J	ENSMUSG00210029942	unclassified gene	Chr11:50191342-50192271 (+)
DBA/2J	ENSMUSG00185028300	unclassified gene	Chr11:50403358-50404291 (+)
FVB/NJ	ENSMUSG00205037751	unclassified gene	Chr11:50233675-50234604 (+)
JF1/MsJ	ENSUMUG00000048498	unclassified gene	Chr11:50778756-50779709 (+)
LP/J	ENSMUSG00230050320	unclassified gene	Chr11:51584511-51585440 (+)
NOD/ShiLtJ	ENSMUSG00190045272	unclassified gene	Chr11:50468175-50469112 (+)
NZO/HlLtJ	ENSMUSG00225033036	unclassified gene	Chr11:53625464-53626389 (+)
PWK/PhJ	ENSLUMG00010035012	unclassified gene	Chr11:50229053-50229994 (+)
SPRET/EiJ	ENSMSPG00010020513	unclassified gene	Chr11:50916719-50917670 (+)
WSB/EiJ	ENSIUOG00005042385	unclassified gene	Chr11:50246112-50247051 (+)

Homology

• Gene Tree
  Gm9945
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm9945
• Incidental Mutations
  Mutagenetix
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000054450 (Evidence)
• NCBI Gene
  791266

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000054450	Ensembl Gene Model | MGI Sequence Detail	932	C57BL/6J
transcript	NR_188986	RefSeq | MGI Sequence Detail	2483	C57BL/6
polypeptide	Q8BNZ3	UniProt | EBI | MGI Sequence Detail	91	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6