Gm10683 Gene Detail

Summary

• Symbol
  Gm10683
• Name
  predicted gene 10683

• Feature Type
  lncRNA gene
• IDs
  MGI:3641650
  NCBI Gene: 100038521
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:37556090-37557463 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  206 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3641650	lncRNA gene	Chr8:37556090-37557463 (-)
129S1/SvImJ	ENSMUSG00200007816	unclassified gene	Chr8:32676854-32678198 (-)
A/J	ENSMUSG00195006224	unclassified gene	Chr8:33157608-33158952 (-)
AKR/J	ENSMUSG00220006025	unclassified gene	Chr8:32921519-32922863 (-)
BALB/cJ	ENSMUSG00180003403	unclassified gene	Chr8:32700863-32702207 (-)
C3H/HeJ	ENSMUSG00175015409	unclassified gene	Chr8:32863245-32864589 (-)
C57BL/6NJ	ENSMUSG00215009687	unclassified gene	Chr8:32625640-32627013 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005005615	unclassified gene	Chr8:32810486-32811856 (-)
CBA/J	ENSMUSG00210012858	unclassified gene	Chr8:32686270-32687614 (-)
DBA/2J	ENSMUSG00185002263	unclassified gene	Chr8:38612484-38613828 (-)
FVB/NJ	ENSMUSG00205002326	unclassified gene	Chr8:31897642-31898986 (-)
JF1/MsJ	ENSUMUG00000014582	unclassified gene	Chr8:40306476-40307849 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016203	unclassified gene	Chr8:32734714-32736058 (-)
NZO/HlLtJ	ENSMUSG00225015083	unclassified gene	Chr8:45864556-45865900 (-)
PWK/PhJ	ENSLUMG00010013323	unclassified gene	Chr8:32524438-32525811 (-)
SPRET/EiJ	ENSMSPG00010004658	unclassified gene	Chr8:33281558-33282933 (-)
WSB/EiJ	ENSIUOG00005006059	unclassified gene	Chr8:33506458-33507818 (-)

Homology

• Gene Tree
  Gm10683
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000109817 (Evidence)
• NCBI Gene
  100038521

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109817	Ensembl Gene Model | MGI Sequence Detail	1374	C57BL/6J
transcript	NR_188712	RefSeq | MGI Sequence Detail	1375	C57BL/6
polypeptide	Q3V0L0	UniProt | EBI | MGI Sequence Detail	69	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;