4930500M09Rik Gene Detail

Summary

• Symbol
  4930500M09Rik
• Name
  RIKEN cDNA 4930500M09 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3630173
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:170042429-170043991 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 76.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3630173	lncRNA gene	Chr1:170042429-170043991 (+)
129S1/SvImJ	ENSMUSG00200046978	lncRNA gene	Chr1:167515728-167517293 (+)
A/J	ENSMUSG00195048492	lncRNA gene	Chr1:166831750-166832448 (+)
AKR/J	ENSMUSG00220032805	lncRNA gene	Chr1:166534072-166535634 (+)
BALB/cJ	ENSMUSG00180046146	lncRNA gene	Chr1:167101929-167103491 (+)
C3H/HeJ	ENSMUSG00175047688	lncRNA gene	Chr1:167171315-167172880 (+)
C57BL/6NJ	ENSMUSG00215045202	lncRNA gene	Chr1:166983177-166984739 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002442	antisense lncRNA gene	Chr1:160470492-160472061 (+)
CAST/EiJ	ENSTCUG00005046917	lncRNA gene	Chr1:165488778-165490341 (+)
CBA/J	ENSMUSG00210041858	lncRNA gene	Chr1:167066966-167068528 (+)
DBA/2J	ENSMUSG00185012068	lncRNA gene	Chr1:171283761-171285323 (+)
FVB/NJ	ENSMUSG00205039849	lncRNA gene	Chr1:166033460-166035025 (+)
JF1/MsJ	ENSUMUG00000013568	lncRNA gene	Chr1:170427028-170428590 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190040580	lncRNA gene	Chr1:166833597-166835162 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010035339	lncRNA gene	Chr1:165821265-165822828 (+)
SPRET/EiJ	ENSMSPG00010049542	lncRNA gene	Chr1:169370786-169372339 (+)
WSB/EiJ	ENSIUOG00005041802	lncRNA gene	Chr1:166241881-166243446 (+)

Homology

• Gene Tree
  4930500M09Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving 4930500M09Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• UniProt
  2

• Ensembl
  ENSMUSG00000044306 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000044306	Ensembl Gene Model | MGI Sequence Detail	1563	C57BL/6J
transcript	ENSMUST00000194988	Ensembl | MGI Sequence Detail	1563	Not Applicable
polypeptide	Q9D590	UniProt | EBI | MGI Sequence Detail	170	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for 4930500M09Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr9921	Chr1:170042395-170042432 (+)	-15 bp