Mir683-1 Gene Detail

Summary

• Symbol
  Mir683-1
• Name
  microRNA 683-1
• Synonyms
  Gm26093, mir 683, Mirn683, Mirn683-1, Mirn683a, mmu-mir-683, mmu-mir-683-1

• Feature Type
  miRNA gene
• IDs
  MGI:3629908
  NCBI Gene: 751559
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:50698662-50698770 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 25.78 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3629908	miRNA gene	Chr13:50698662-50698770 (-)
129S1/SvImJ	ENSMUSG00200036656	miRNA gene	Chr13:47827630-47827738 (-)
A/J	ENSMUSG00195030628	miRNA gene	Chr13:46749934-46750042 (+)
AKR/J	ENSMUSG00220009934	miRNA gene	Chr13:46583730-46583838 (+)
BALB/cJ	ENSMUSG00180009113	miRNA gene	Chr13:47279008-47279116 (-)
C3H/HeJ	ENSMUSG00175030195	miRNA gene	Chr13:46839358-46839466 (+)
C57BL/6NJ	ENSMUSG00215006706	miRNA gene	Chr13:46949946-46950054 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033141	miRNA gene	Chr13:47159043-47159151 (+)
CBA/J	ENSMUSG00210028717	miRNA gene	Chr13:47271275-47271383 (-)
DBA/2J	ENSMUSG00185031883	miRNA gene	Chr13:48120189-48120297 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000017766	miRNA gene	Chr13:47266805-47266913 (+)
LP/J	ENSMUSG00230029228	miRNA gene	Chr13:57440933-57441041 (-)
NOD/ShiLtJ	ENSMUSG00190012433	miRNA gene	Chr13:47197342-47197450 (-)
NZO/HlLtJ	ENSMUSG00225035415	miRNA gene	Chr13:51191367-51191475 (-)
PWK/PhJ	ENSLUMG00010022642	miRNA gene	Chr13:46410856-46410964 (-)
SPRET/EiJ	ENSMSPG00010029949	miRNA gene	Chr13:46872293-46872401 (-)
SPRET/EiJ	ENSMSPG00010034639	miRNA gene	Chr13:46286840-46286948 (+)
SPRET/EiJ	ENSMSPG00010034669	miRNA gene	Chr13:46488469-46488577 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Mir683-1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir683-1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000119579 (Evidence)
• NCBI Gene
  751559

Representative Sequences			Length	Strain/Species
genomic	751559	NCBI Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	NR_030453	RefSeq | MGI Sequence Detail	109	C57BL/6

Molecular
Reagents

• All nucleic 1

  Other 1

Other Database
Links

miRBase

MI0004646

Other
Accession IDs

MGI:5455870

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582