Mir698 Gene Detail

Summary

• Symbol
  Mir698
• Name
  microRNA 698
• Synonyms
  mir-698, Mirn698, mmu-mir-698

• Feature Type
  miRNA gene
• IDs
  MGI:3629653
  NCBI Gene: 735263
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr4:124637574-124637682 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 57.89 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3629653	miRNA gene	Chr4:124637574-124637682 (+)
129S1/SvImJ	ENSMUSG00200014519	miRNA gene	Chr4:118069390-118069498 (+)
A/J	ENSMUSG00195032760	miRNA gene	Chr4:119397659-119397767 (+)
AKR/J	ENSMUSG00220022221	miRNA gene	Chr4:118366659-118366767 (+)
BALB/cJ	ENSMUSG00180046770	miRNA gene	Chr4:117044656-117044764 (+)
C3H/HeJ	ENSMUSG00175026511	miRNA gene	Chr4:118057583-118057691 (+)
C57BL/6NJ	ENSMUSG00215040175	miRNA gene	Chr4:119550020-119550128 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007896	miRNA gene	Chr4:114512019-114512127 (+)
CAST/EiJ	ENSTCUG00005046592	miRNA gene	Chr4:118908741-118908849 (+)
CBA/J	ENSMUSG00210052775	miRNA gene	Chr4:117686428-117686536 (+)
DBA/2J	ENSMUSG00185048483	miRNA gene	Chr4:119219071-119219179 (+)
FVB/NJ	ENSMUSG00205031025	miRNA gene	Chr4:117417862-117417970 (+)
JF1/MsJ	ENSUMUG00000024113	miRNA gene	Chr4:119840874-119840982 (+)
LP/J	ENSMUSG00230039002	miRNA gene	Chr4:123007265-123007373 (+)
NOD/ShiLtJ	ENSMUSG00190045823	miRNA gene	Chr4:117417613-117417721 (+)
NZO/HlLtJ	ENSMUSG00225016552	miRNA gene	Chr4:128911562-128911670 (+)
PWK/PhJ	ENSLUMG00010047446	miRNA gene	Chr4:116863015-116863123 (+)
SPRET/EiJ	ENSMSPG00010041843	miRNA gene	Chr4:118947430-118947538 (+)
WSB/EiJ	ENSIUOG00005047177	miRNA gene	Chr4:117279193-117279301 (+)

Homology

• Gene Tree
  Mir698
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  2
• Genomic Mutations
  4 involving Mir698
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000076119 (Evidence)
• NCBI Gene
  735263

Representative Sequences			Length	Strain/Species
genomic	735263	NCBI Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	NR_030480	RefSeq | MGI Sequence Detail	109	C57BL/6

Molecular
Reagents

• All nucleic 1

  Other 1

Other Database
Links

miRBase

MI0004682

References

• Summaries
  All 16

  Developmental Gene Expression 1

  Phenotypes 7
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:183008 Li Y, et al., Isolation of fetal gonads from embryos of timed-pregnant mice for morphological and molecular studies. Methods Mol Biol. 2012;825:3-16

TSS for Mir698:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr38910	Chr4:124636710-124636722 (+)	-858 bp
Tssr38911	Chr4:124636725-124636736 (+)	-843 bp