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Mir684-1 Gene Detail
Summary
  • Symbol
    Mir684-1
  • Name
    microRNA 684-1
  • Synonyms
    mir 684-1, Mirn684-1, mmu-mir-684-1
Location &
Maps
more
  • Sequence Map
    Chr2:80459049-80459134 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 48.32 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    93 from dbSNP Build 142
  • Strain Annotations
    45
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3629628
 miRNA gene Chr2:80459049-80459134 (-)
129S1/SvImJ ENSMUSG00200031555
 miRNA gene Chr18:42462140-42462224 (-)
129S1/SvImJ ENSMUSG00200009893
 miRNA gene Chr1:128522544-128522628 (+)
129S1/SvImJ ENSMUSG00200004162
 miRNA gene Chr2:77501654-77501739 (-)
A/J ENSMUSG00195021419
 miRNA gene Chr2:77692185-77692270 (-)
AKR/J ENSMUSG00220037095
 miRNA gene ChrX:2330922-2331006 (+)
AKR/J ENSMUSG00220002570
 miRNA gene Chr2:77703815-77703900 (-)
AKR/J ENSMUSG00220014366
 miRNA gene Chr2:15590353-15590437 (-)
BALB/cJ ENSMUSG00180008129
 miRNA gene Chr18:43095521-43095605 (-)
BALB/cJ ENSMUSG00180006917
 miRNA gene Chr2:77620039-77620124 (-)
BALB/cJ ENSMUSG00180028301
 miRNA gene Chr1:12142075-12142159 (-)
C3H/HeJ ENSMUSG00175011464
 miRNA gene Chr18:42614152-42614236 (-)
C3H/HeJ ENSMUSG00175011211
 miRNA gene Chr2:77747613-77747698 (-)
C3H/HeJ ENSMUSG00175051766
 miRNA gene Chr16:16936091-16936175 (-)
C57BL/6NJ ENSMUSG00215010038
 miRNA gene Chr18:42303306-42303390 (-)
C57BL/6NJ ENSMUSG00215043459
 miRNA gene Chr16:16657036-16657120 (-)
C57BL/6NJ ENSMUSG00215025716
 miRNA gene Chr2:77580586-77580671 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005046716
 miRNA gene Chr11:81912400-81912484 (-)
CAST/EiJ ENSTCUG00005053799
 miRNA gene Chr11:71639443-71639527 (-)
CAST/EiJ ENSTCUG00005032481
 miRNA gene Chr2:77085309-77085394 (-)
CAST/EiJ ENSTCUG00005045199
 miRNA gene Chr11:48801788-48801872 (-)
CAST/EiJ ENSTCUG00005042577
 miRNA gene Chr10:125256423-125256507 (+)
CAST/EiJ ENSTCUG00005052289
 miRNA gene Chr10:74214896-74214980 (+)
CAST/EiJ ENSTCUG00005050177
 miRNA gene Chr7:117951012-117951096 (+)
CAST/EiJ ENSTCUG00005035814
 miRNA gene ChrX:2290707-2290791 (+)
CAST/EiJ ENSTCUG00005044644
 miRNA gene Chr2:149681415-149681499 (-)
CBA/J ENSMUSG00210002420
 miRNA gene Chr2:77779942-77780027 (-)
CBA/J ENSMUSG00210048370
 miRNA gene Chr11:71929351-71929435 (-)
CBA/J ENSMUSG00210003052
 miRNA gene Chr1:11941120-11941204 (-)
DBA/2J ENSMUSG00185036597
 miRNA gene Chr16:16896617-16896701 (-)
DBA/2J ENSMUSG00185021098
 miRNA gene Chr11:82493701-82493785 (-)
DBA/2J ENSMUSG00185011652
 miRNA gene Chr2:77616279-77616364 (-)
FVB/NJ ENSMUSG00205018531
 miRNA gene Chr1:12219063-12219147 (-)
FVB/NJ ENSMUSG00205020716
 miRNA gene Chr2:76970601-76970686 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230001657
 miRNA gene Chr1:131700721-131700805 (+)
LP/J ENSMUSG00230030220
 miRNA gene Chr18:44638840-44638924 (-)
LP/J ENSMUSG00230026975
 miRNA gene Chr2:79421926-79422011 (-)
NOD/ShiLtJ ENSMUSG00190011142
 miRNA gene Chr2:77701078-77701163 (-)
NOD/ShiLtJ ENSMUSG00190016686
 miRNA gene Chr10:126354135-126354219 (+)
NZO/HlLtJ ENSMUSG00225027918
 miRNA gene Chr18:44518762-44518846 (-)
NZO/HlLtJ ENSMUSG00225006020
 miRNA gene Chr1:16375788-16375872 (-)
NZO/HlLtJ ENSMUSG00225003731
 miRNA gene Chr2:87172047-87172132 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ ENSIUOG00005010004
 miRNA gene Chr18:42271743-42271827 (-)
WSB/EiJ ENSIUOG00005011638
 miRNA gene Chr2:78250407-78250492 (+)
WSB/EiJ ENSIUOG00005012576
 miRNA gene Chr1:12065942-12066026 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    49
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 735274 NCBI Gene Model | MGI Sequence Detail 86 C57BL/6J ±  kb
transcript NR_030454 RefSeq | MGI Sequence Detail 86 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Other 1
Other Database
Links
less
miRBase MI0004647
References
more
  • Summaries
    All 13
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory