Mir341 Gene Detail

Summary

• Symbol
  Mir341
• Name
  microRNA 341
• Synonyms
  mir 341, Mirn341, mmu-mir-341

• Feature Type
  miRNA gene
• IDs
  MGI:3619357
  NCBI Gene: 723846
• Member of
  Mirc43 cluster
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:109577934-109578029 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 60.43 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3619357	miRNA gene	Chr12:109577934-109578029 (+)
129S1/SvImJ	ENSMUSG00200028218	miRNA gene	Chr12:101351688-101351783 (+)
A/J	ENSMUSG00195049330	miRNA gene	Chr12:103883449-103883544 (+)
AKR/J	ENSMUSG00220041502	miRNA gene	Chr12:101765932-101766027 (+)
BALB/cJ	ENSMUSG00180052659	miRNA gene	Chr12:103114837-103114932 (+)
C3H/HeJ	ENSMUSG00175044351	miRNA gene	Chr12:105693888-105693983 (+)
C57BL/6NJ	ENSMUSG00215049658	miRNA gene	Chr12:102387793-102387888 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007255	miRNA gene	Chr12:104061290-104061385 (+)
CAST/EiJ	ENSTCUG00005021237	miRNA gene	Chr12:101866599-101866690 (+)
CBA/J	ENSMUSG00210032080	miRNA gene	Chr12:102755341-102755436 (+)
DBA/2J	ENSMUSG00185029309	miRNA gene	Chr12:104574095-104574190 (+)
FVB/NJ	ENSMUSG00205046371	miRNA gene	Chr12:101799699-101799794 (+)
JF1/MsJ	ENSUMUG00000036636	miRNA gene	Chr12:109331809-109331904 (+)
LP/J	ENSMUSG00230031600	miRNA gene	Chr12:111616587-111616682 (+)
NOD/ShiLtJ	ENSMUSG00190027492	miRNA gene	Chr12:83423445-83423540 (-)
NZO/HlLtJ	ENSMUSG00225039391	miRNA gene	Chr12:113375454-113375549 (+)
PWK/PhJ	ENSLUMG00010047611	miRNA gene	Chr12:102804248-102804343 (+)
SPRET/EiJ	ENSMSPG00010018569	miRNA gene	Chr12:105087549-105087644 (+)
WSB/EiJ	ENSIUOG00005009179	miRNA gene	Chr12:101797219-101797314 (+)

Homology

• Gene Tree
  Mir341
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  601
• Tissues
  1
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000070101 (Evidence)
• NCBI Gene
  723846

Representative Sequences			Length	Strain/Species
genomic	723846	NCBI Gene Model | MGI Sequence Detail	96	C57BL/6J
transcript	NR_029770	RefSeq | MGI Sequence Detail	96	C57BL/6

Molecular
Reagents

• All nucleic 2

  Primer pair 1

  Other 1

Other Database
Links

miRBase

MI0000625

References

• Summaries
  All 10

  Developmental Gene Expression 1

  Phenotypes 1
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
• Latest
  J:344890 Zhang L, et al., Meg8-DMR as the Secondary Regulatory Region Regulates the Expression of MicroRNAs While It Does Not Affect Embryonic Development in Mice. Genes (Basel). 2023 Jun 14;14(6)

TSS for Mir341:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr115147	Chr12:109576130-109576134 (+)	-1,802 bp