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Mir196b Gene Detail
Summary
  • Symbol
    Mir196b
  • Name
    microRNA 196b
  • Synonyms
    mir 196b, Mirn196b, mmu-mir-196b
Location &
Maps
more
  • Sequence Map
    Chr6:52207061-52207145 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 25.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3618741
 miRNA gene Chr6:52207061-52207145 (-)
129S1/SvImJ ENSMUSG00200005776
 miRNA gene Chr6:49184345-49184429 (-)
A/J ENSMUSG00195006940
 miRNA gene Chr6:48908285-48908369 (-)
AKR/J ENSMUSG00220004395
 miRNA gene Chr6:48617355-48617439 (-)
BALB/cJ ENSMUSG00180025833
 miRNA gene Chr6:49210020-49210104 (-)
C3H/HeJ ENSMUSG00175017465
 miRNA gene Chr6:48976596-48976680 (-)
C57BL/6NJ ENSMUSG00215011935
 miRNA gene Chr6:49160838-49160922 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008026
 miRNA gene Chr6:46713758-46713842 (-)
CAST/EiJ ENSTCUG00005005091
 miRNA gene Chr6:48466998-48467082 (-)
CBA/J ENSMUSG00210018459
 miRNA gene Chr6:49020905-49020989 (-)
DBA/2J ENSMUSG00185014073
 miRNA gene Chr6:49603131-49603215 (-)
FVB/NJ ENSMUSG00205028799
 miRNA gene Chr6:49261242-49261326 (-)
JF1/MsJ ENSUMUG00000015243
 miRNA gene Chr6:48975959-48976043 (-)
LP/J ENSMUSG00230019646
 miRNA gene Chr6:50681636-50681720 (-)
NOD/ShiLtJ ENSMUSG00190036022
 miRNA gene Chr6:48938305-48938389 (-)
NZO/HlLtJ ENSMUSG00225013724
 miRNA gene Chr6:52665631-52665715 (-)
PWK/PhJ ENSLUMG00010022429
 miRNA gene Chr6:48713008-48713092 (-)
SPRET/EiJ ENSMSPG00010010805
 miRNA gene Chr6:49296946-49297030 (-)
WSB/EiJ ENSIUOG00005029740
 miRNA gene Chr6:49283707-49283791 (-)



Homology
more
  • Human Ortholog
    MIR196B, microRNA 196b
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR196B, microRNA 196b
  • Synonyms
    miR-196b, MIRN196B, miRNA196B
  • Links
    NCBI Gene ID: 442920

  • Chr Location
    chr7:27169480-27169563 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    2 phenotypes from multigenic genotypes
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit anterior homeotic transformation with a rudimentary rib on the first lumbar vertebra and posterior displacement of the sacrum or anterior homeotic transformation of all sacral elements with posterior displacement of the sacrum.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    612
  • Tissues
    13
  • Literature Summary
    6
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    • All Sequences
      24
    • RefSeq
      1
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 723820 NCBI Gene Model | MGI Sequence Detail 85 C57BL/6J ±  kb
    transcript NR_029912 RefSeq | MGI Sequence Detail 85 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 4
      Primer pair 1
      Other 3
    Other Database
    Links
    less
    miRBase MI0001151
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 6
      Gene Ontology 2
      Phenotypes 13
    • Earliest
      J:90106 Yekta S, et al., MicroRNA-directed cleavage of HOXB8 mRNA. Science. 2004 Apr 23;304(5670):594-6
    • Latest
      J:361612 Lawler ME, et al., Letter: miR-196b-Oct1/2 axis regulates DNMT3A-mutant AML pathogenesis. Leukemia. 2025 Jan;39(1):229-233
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory