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Slc39a1-ps Pseudogene Detail
Summary
  • Symbol
    Slc39a1-ps
  • Name
    solute carrier family 39 (zinc transporter), member 1, pseudogene
Location &
Maps
more
  • Sequence Map
    Chr2:30049410-30050378 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 21.27 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3615375
 pseudogene Chr2:30049295-30051612 (+)
129S1/SvImJ ENSMUSG00200053392
 pseudogene Chr2:27019896-27020864 (+)
A/J ENSMUSG00195049678
 pseudogene Chr2:27113252-27114220 (+)
AKR/J ENSMUSG00220053649
 pseudogene Chr2:27231797-27232765 (+)
BALB/cJ ENSMUSG00180054496
 pseudogene Chr2:27132782-27133750 (+)
C3H/HeJ ENSMUSG00175053872
 pseudogene Chr2:27102095-27103063 (+)
C57BL/6NJ ENSMUSG00215049468
 pseudogene Chr2:27167521-27168489 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005053486
 pseudogene Chr2:26841573-26842541 (+)
CBA/J ENSMUSG00210018031
 pseudogene Chr2:27175025-27175993 (+)
DBA/2J ENSMUSG00185053091
 pseudogene Chr2:27027317-27028285 (+)
FVB/NJ ENSMUSG00205050518
 pseudogene Chr2:26879389-26880357 (+)
JF1/MsJ ENSUMUG00000056763
 pseudogene Chr2:26926352-26927320 (+)
LP/J ENSMUSG00230045518
 pseudogene Chr2:28955622-28956590 (+)
NOD/ShiLtJ ENSMUSG00190052901
 pseudogene Chr2:27134061-27135029 (+)
NZO/HlLtJ ENSMUSG00225011069
 pseudogene Chr2:36705223-36706191 (+)
PWK/PhJ ENSLUMG00010052784
 pseudogene Chr2:27003633-27004602 (+)
SPRET/EiJ ENSMSPG00010046937
 pseudogene Chr2:27728094-27728977 (+)
WSB/EiJ ENSIUOG00005052647
 pseudogene Chr2:26986820-26987788 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085401 Ensembl Gene Model | MGI Sequence Detail 969 C57BL/6J ±  kb
transcript ENSMUST00000120862 Ensembl | MGI Sequence Detail 969 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:57132 Lioumi M, et al., Isolation and characterization of human and mouse ZIRTL, a member of the IRT1 family of transporters, mapping within the epidermal differentiation complex. Genomics. 1999 Dec 1;62(2):272-80
  • Latest
    J:87178 Dufner-Beattie J, et al., Structure, function, and regulation of a subfamily of mouse zinc transporter genes. J Biol Chem. 2003 Dec 12;278(50):50142-50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory