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CN725425 Gene Detail
Summary
  • Symbol
    CN725425
  • Name
    cDNA sequence CN725425
  • Synonyms
    Gm5807
  • Feature Type
    protein coding gene
  • IDs
    MGI:3613655
    NCBI Gene: 545126
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:91083697-91145097 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 46.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    254 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3613655
 protein coding gene Chr15:91083654-91146291 (+)
129S1/SvImJ MGP_129S1SvImJ_G0022247
 protein coding gene Chr15:92479561-92550115 (+)
A/J MGP_AJ_G0022206
 protein coding gene Chr15:88910257-88972141 (+)
AKR/J MGP_AKRJ_G0022181
 protein coding gene Chr15:91552083-91616014 (+)
BALB/cJ MGP_BALBcJ_G0022212
 protein coding gene Chr15:89031900-89094213 (+)
C3H/HeJ MGP_C3HHeJ_G0021982
 protein coding gene Chr15:91547858-91621864 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022657
 protein coding gene Chr15:95867291-95934908 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020183
 protein coding gene Chr15:85057761-85118763 (+)
CAST/EiJ MGP_CASTEiJ_G0021504
 protein coding gene Chr15:92365109-92433191 (+)
CBA/J MGP_CBAJ_G0021949
 protein coding gene Chr15:99076569-99147418 (+)
DBA/2J MGP_DBA2J_G0022076
 protein coding gene Chr15:88360232-88421237 (+)
FVB/NJ MGP_FVBNJ_G0022055
 protein coding gene Chr15:87402011-87463412 (+)
LP/J MGP_LPJ_G0022147
 protein coding gene Chr15:92617156-92686373 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022075
 protein coding gene Chr15:103468220-103536537 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022672
 protein coding gene Chr15:91660429-91730061 (+)
PWK/PhJ MGP_PWKPhJ_G0021245
 protein coding gene Chr15:88405502-88467401 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021079
 protein coding gene Chr15:91380163-91442013 (+)
WSB/EiJ MGP_WSBEiJ_G0021553
 protein coding gene Chr15:92117511-92183664 (+)



Homology
more
  • Human Ortholog
    C12orf40, chromosome 12 open reading frame 40
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C12orf40, chromosome 12 open reading frame 40
  • Synonyms
    HEL-206, HEL-S-94
  • Links
    NCBI Gene ID: 283461
    neXtProt AC: NX_Q86WS4
    UniProt: Q86WS4

  • Chr Location
    12q12; chr12:39626167-39908300 (+)  GRCh38.p7
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    2
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078932 Ensembl Gene Model | MGI Sequence Detail 61401 C57BL/6J ±  kb
transcript ENSMUST00000190436 Ensembl | MGI Sequence Detail 2041 Not Applicable  
polypeptide ENSMUSP00000140772 Ensembl | MGI Sequence Detail 652 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027883 Protein of unknown function DUF4552
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
Other
Accession IDs
less
MGI:3779525
References
more
  • Summaries
    All 29
    Diseases 1
    Phenotypes 20
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/21/2023
MGI 6.22 		The Jackson Laboratory