B020010K11Rik Gene Detail

Summary

• Symbol
  B020010K11Rik
• Name
  RIKEN cDNA B020010K11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3612155
  NCBI Gene: 621740
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:82354375-82379725 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  934 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3612155	lncRNA gene	Chr18:82354375-82379725 (-)
129S1/SvImJ	ENSMUSG00200028916	lncRNA gene	Chr18:79572588-79598116 (-)
A/J	ENSMUSG00195004866	lncRNA gene	Chr18:79658526-79684071 (-)
AKR/J	ENSMUSG00220017400	lncRNA gene	Chr18:79581673-79607199 (-)
BALB/cJ	ENSMUSG00180013751	lncRNA gene	Chr18:80228869-80254417 (-)
C3H/HeJ	ENSMUSG00175013424	lncRNA gene	Chr18:79769103-79794617 (-)
C57BL/6NJ	ENSMUSG00215024921	lncRNA gene	Chr18:79147978-79173495 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030408	lncRNA gene	Chr18:78676588-78698897 (-)
CBA/J	ENSMUSG00210036519	lncRNA gene	Chr18:79719566-79745082 (-)
DBA/2J	ENSMUSG00185011703	lncRNA gene	Chr18:79624853-79650374 (-)
FVB/NJ	ENSMUSG00205017482	lncRNA gene	Chr18:79032928-79058460 (-)
JF1/MsJ	ENSUMUG00000035949	lncRNA gene	Chr18:79517330-79542899 (-)
LP/J	ENSMUSG00230014634	lncRNA gene	Chr18:81674788-81700321 (-)
NOD/ShiLtJ	ENSMUSG00190022925	lncRNA gene	Chr18:79450010-79475538 (-)
NZO/HlLtJ	ENSMUSG00225035220	lncRNA gene	Chr18:81549701-81575214 (-)
PWK/PhJ	ENSLUMG00010007230	lncRNA gene	Chr18:79897365-79922955 (-)
SPRET/EiJ	ENSMSPG00010008987	lncRNA gene	Chr18:80274978-80295637 (-)
WSB/EiJ	ENSIUOG00005008487	lncRNA gene	Chr18:79084809-79108797 (-)

Homology

• Gene Tree
  B020010K11Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving B020010K11Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  293

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000118057 (Evidence)
• NCBI Gene
  621740

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118057	Ensembl Gene Model | MGI Sequence Detail	25351	C57BL/6J
transcript	ENSMUST00000235445	Ensembl | MGI Sequence Detail	3579	Not Applicable

Molecular
Reagents

• All nucleic 293

  cDNA 293

References

• Summaries
  All 7

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;