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Ccdc63 Gene Detail
Summary
  • Symbol
    Ccdc63
  • Name
    coiled-coil domain containing 63
  • Synonyms
    4921511C16Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3607777
    NCBI Gene: 330188
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:122246115-122276143 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 62.17 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    76 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3607777
 protein coding gene Chr5:122246103-122278886 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030042
 protein coding gene Chr5:125713192-125756903 (-)
A/J MGP_AJ_G0030007
 protein coding gene Chr5:120522947-120557033 (-)
AKR/J MGP_AKRJ_G0029943
 protein coding gene Chr5:124390561-124423117 (-)
BALB/cJ MGP_BALBcJ_G0030018
 protein coding gene Chr5:121867823-121904215 (-)
C3H/HeJ MGP_C3HHeJ_G0029735
 protein coding gene Chr5:124996548-125040385 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030471
 protein coding gene Chr5:130534887-130589081 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027697
 protein coding gene Chr5:115139945-115173180 (-)
CAST/EiJ MGP_CASTEiJ_G0029144
 protein coding gene Chr5:124103919-124144624 (-)
CBA/J MGP_CBAJ_G0029705
 protein coding gene Chr5:135659144-135704120 (-)
DBA/2J MGP_DBA2J_G0029855
 protein coding gene Chr5:120574491-120610539 (-)
FVB/NJ MGP_FVBNJ_G0029811
 protein coding gene Chr5:119554066-119589823 (-)
LP/J MGP_LPJ_G0029944
 protein coding gene Chr5:126254448-126290173 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0029842
 protein coding gene Chr5:139441386-139478480 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030512
 protein coding gene Chr5:123964917-124000523 (-)
PWK/PhJ MGP_PWKPhJ_G0028858
 protein coding gene Chr5:119335821-119371145 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028695
 protein coding gene Chr5:121689046-121731061 (-)
WSB/EiJ MGP_WSBEiJ_G0029219
 protein coding gene Chr5:124647898-124685676 (-)



Homology
more
  • Human Ortholog
    CCDC63, coiled-coil domain containing 63
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC63, coiled-coil domain containing 63
  • Synonyms
    ODA5
  • Links
    NCBI Gene ID: 160762
    neXtProt AC: NX_Q8NA47
    UniProt: Q8NA47

  • Chr Location
    12q24.11; chr12:110844486-110907535 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit male infertility, defects in sperm heads and impaired elongation of flagella with no motile spermatozoa.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
DNA-templated transcription
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 330188 NCBI Gene Model | MGI Sequence Detail 30029 C57BL/6J ±  kb
    transcript NM_183307 RefSeq | MGI Sequence Detail 2287 C57BL/6  
    polypeptide Q8CDV6 UniProt | EBI | MGI Sequence Detail 558 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 9
      cDNA 9

      Microarray probesets 3
    References
    more
    • Summaries
      All 28
      Gene Ontology 3
      Phenotypes 8
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:231237 Young SA, et al., CRISPR/Cas9-Mediated Rapid Generation of Multiple Mouse Lines Identified Ccdc63 as Essential for Spermiogenesis. Int J Mol Sci. 2015;16(10):24732-50
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/21/2023
    MGI 6.22     		The Jackson Laboratory