F730048M01Rik Gene Detail

Summary

• Symbol
  F730048M01Rik
• Name
  RIKEN cDNA F730048M01 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3604191
  NCBI Gene: 641453
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:65439501-65442947 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 38.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  247 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3604191	lncRNA gene	Chr18:65439501-65442947 (+)
129S1/SvImJ	ENSMUSG00200026307	lncRNA gene	Chr18:62633402-62636850 (+)
A/J	ENSMUSG00195032672	lncRNA gene	Chr18:62668278-62671726 (+)
AKR/J	ENSMUSG00220023086	lncRNA gene	Chr18:62641930-62645378 (+)
BALB/cJ	ENSMUSG00180012253	lncRNA gene	Chr18:63235251-63238699 (+)
C3H/HeJ	ENSMUSG00175010851	lncRNA gene	Chr18:62839525-62842973 (+)
C57BL/6NJ	ENSMUSG00215023970	lncRNA gene	Chr18:62179459-62182905 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015928	lncRNA gene	Chr18:61842025-61845460 (+)
CBA/J	ENSMUSG00210032351	lncRNA gene	Chr18:62797461-62800909 (+)
DBA/2J	ENSMUSG00185030965	lncRNA gene	Chr18:62706715-62710161 (+)
FVB/NJ	ENSMUSG00205013215	lncRNA gene	Chr18:62182198-62185646 (+)
JF1/MsJ	ENSUMUG00000040992	lncRNA gene	Chr18:62611468-62614902 (+)
LP/J	ENSMUSG00230039399	lncRNA gene	Chr18:64766463-64769911 (+)
NOD/ShiLtJ	ENSMUSG00190008383	lncRNA gene	Chr18:62441587-62445035 (+)
NZO/HlLtJ	ENSMUSG00225030656	lncRNA gene	Chr18:64652642-64656076 (+)
PWK/PhJ	ENSLUMG00010026204	lncRNA gene	Chr18:63010746-63014174 (+)
SPRET/EiJ	ENSMSPG00010039952	lncRNA gene	Chr18:63157861-63161290 (+)
WSB/EiJ	ENSIUOG00005006355	lncRNA gene	Chr18:62233079-62236527 (+)

Homology

• Gene Tree
  F730048M01Rik
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• UniProt
  1

• Ensembl
  ENSMUSG00000118101 (Evidence)
• NCBI Gene
  641453

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000118101	Ensembl Gene Model | MGI Sequence Detail	3447	C57BL/6J
transcript	ENSMUST00000235286	Ensembl | MGI Sequence Detail	2148	Not Applicable
polypeptide	Q3U323	UniProt | EBI | MGI Sequence Detail	103	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 6
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;