A230005M16Rik Gene Detail

Summary

• Symbol
  A230005M16Rik
• Name
  RIKEN cDNA A230005M16 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3603401
  NCBI Gene: 654807
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:25595862-25599728 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 17.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  33 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3603401	lncRNA gene	Chr2:25595862-25599728 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003522	antisense lncRNA gene	Chr2:23625736-23634406 (-)
A/J	MGP_AJ_G0003502	antisense lncRNA gene	Chr2:22709776-22713642 (-)
AKR/J	MGP_AKRJ_G0003481	antisense lncRNA gene	Chr2:23459356-23461771 (-)
BALB/cJ	MGP_BALBcJ_G0003491	antisense lncRNA gene	Chr2:22816224-22820042 (-)
C3H/HeJ	MGP_C3HHeJ_G0003439	antisense lncRNA gene	Chr2:23397084-23400950 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003629	antisense lncRNA gene	Chr2:24379340-24381755 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003139	antisense lncRNA gene	Chr2:21606938-21610780 (-)
CAST/EiJ	MGP_CASTEiJ_G0003402	antisense lncRNA gene	Chr2:23268950-23272843 (-)
CBA/J	MGP_CBAJ_G0003436	antisense lncRNA gene	Chr2:25211012-25215675 (-)
DBA/2J	MGP_DBA2J_G0003444	antisense lncRNA gene	Chr2:22551273-22553688 (-)
FVB/NJ	MGP_FVBNJ_G0003463	antisense lncRNA gene	Chr2:22287271-22289686 (-)
LP/J	MGP_LPJ_G0003517	antisense lncRNA gene	Chr2:23557080-23562524 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003451	antisense lncRNA gene	Chr2:25388011-25390426 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003632	antisense lncRNA gene	Chr2:23423303-23429224 (-)
PWK/PhJ	MGP_PWKPhJ_G0003358	antisense lncRNA gene	Chr2:22350341-22352770 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003303	antisense lncRNA gene	Chr2:23551970-23554372 (-)
WSB/EiJ	MGP_WSBEiJ_G0003437	antisense lncRNA gene	Chr2:23483136-23490939 (-)

Homology

• Gene Tree
  A230005M16Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  8

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000087612 (Evidence)
• NCBI Gene
  654807

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087612	Ensembl Gene Model | MGI Sequence Detail	3867	C57BL/6J
transcript	ENSMUST00000137661	Ensembl | MGI Sequence Detail	1605	Not Applicable

Molecular
Reagents

• All nucleic 8

  cDNA 8

References

• Summaries
  All 7
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;