About   Help   FAQ
Muc3a Gene Detail
Summary
  • Symbol
    Muc3a
  • Name
    mucin 3A, cell surface associated
  • Synonyms
    A630081J09Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588263
    NCBI Gene: 619309
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:137243270-137246852 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    10 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588263
 protein coding gene Chr5:137243263-137276564 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030219
 protein coding gene Chr5:141973259-141982867 (-)
A/J MGP_AJ_G0030187
 protein coding gene Chr5:135790392-135794013 (-)
AKR/J MGP_AKRJ_G0030120
 protein coding gene Chr5:140196177-140204229 (-)
BALB/cJ MGP_BALBcJ_G0030197
 protein coding gene Chr5:137165029-137170498 (-)
C3H/HeJ MGP_C3HHeJ_G0029913
 protein coding gene Chr5:140853133-140861469 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030649
 protein coding gene Chr5:147229942-147240157 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027867
 protein coding gene Chr5:130052030-130073879 (-)
CAST/EiJ MGP_CASTEiJ_G0029323
 protein coding gene Chr5:140245693-140253399 (-)
CBA/J MGP_CBAJ_G0029883
 protein coding gene Chr5:153035338-153043068 (-)
DBA/2J MGP_DBA2J_G0030034
 protein coding gene Chr5:135704744-135713039 (-)
FVB/NJ MGP_FVBNJ_G0029989
 protein coding gene Chr5:134891619-134897349 (-)
LP/J MGP_LPJ_G0030123
 protein coding gene Chr5:142423352-142432898 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030021
 protein coding gene Chr5:155913798-155922531 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030690
 protein coding gene Chr5:140043416-140047007 (-)
PWK/PhJ MGP_PWKPhJ_G0029036
 protein coding gene Chr5:134784150-134815088 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028872
 protein coding gene Chr5:137606053-137613703 (-)
WSB/EiJ MGP_WSBEiJ_G0029396
 protein coding gene Chr5:140775591-140790902 (-)



Homology
more
  • Human Ortholog
    MUC3A, mucin 3A, cell surface associated
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MUC3A, mucin 3A, cell surface associated
  • Synonyms
    MUC3, MUC-3A
  • Links
    NCBI Gene ID: 4584
    neXtProt AC: NX_Q02505
    UniProt: Q02505

  • Chr Location
    7q22.1; chr7:100949534-100968347 (+)  GRCh38
  • Human Ortholog
    MUC3B, mucin 3B, cell surface associated
  • Synonyms
    MUC3, MUC3A
  • Links
    NCBI Gene ID: 57876
    UniProt: Q9H195

  • Chr Location
    7q22
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    38
  • RefSeq
    11
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094840 Ensembl Gene Model | MGI Sequence Detail 3583 C57BL/6J ±  kb
transcript ENSMUST00000179412 Ensembl | MGI Sequence Detail 1881 Not Applicable  
polypeptide ENSMUSP00000136061 Ensembl | MGI Sequence Detail 218 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR042382 Chondroitin sulfate proteoglycan 5
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory