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Spata31d1c Gene Detail
Summary
  • Symbol
    Spata31d1c
  • Name
    spermatogenesis associated 31 subfamily D, member 1C
  • Synonyms
    4932441B19Rik, Fam75d1c
  • Feature Type
    protein coding gene
  • IDs
    MGI:3588241
    NCBI Gene: 238683
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:65180872-65185818 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 34.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    75 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3588241
 protein coding gene Chr13:65180872-65185818 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020683
 protein coding gene Chr13:65044277-65049197 (+)
A/J MGP_AJ_G0020637
 protein coding gene Chr13:62675371-62680291 (+)
AKR/J MGP_AKRJ_G0020614
 protein coding gene Chr13:64745202-64750122 (+)
BALB/cJ MGP_BALBcJ_G0020635
 protein coding gene Chr13:63106768-63111682 (+)
C3H/HeJ MGP_C3HHeJ_G0020430
 protein coding gene Chr13:64276911-64281919 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021071
 protein coding gene Chr13:67170148-67175084 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018647
 protein coding gene Chr13:60339095-60344091 (+)
CAST/EiJ MGP_CASTEiJ_G0019947
 protein coding gene Chr13:64321481-64326755 (+)
CBA/J MGP_CBAJ_G0020390
 protein coding gene Chr13:69729762-69734744 (+)
DBA/2J MGP_DBA2J_G0020515
 protein coding gene Chr13:62517869-62522832 (+)
FVB/NJ MGP_FVBNJ_G0020494
 protein coding gene Chr13:61594947-61599879 (+)
LP/J MGP_LPJ_G0020589
 protein coding gene Chr13:65328329-65333259 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020523
 protein coding gene Chr13:68658201-68663174 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021113
 protein coding gene Chr13:64072088-64077076 (+)
PWK/PhJ MGP_PWKPhJ_G0019701
 protein coding gene Chr13:62079640-62084720 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019527
 protein coding gene Chr13:62256293-62261243 (+)
WSB/EiJ MGP_WSBEiJ_G0020007
 protein coding gene Chr13:64537943-64542859 (+)



Homology
more
  • Human Ortholog
    SPATA31D3, SPATA31 subfamily D member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATA31D3, SPATA31 subfamily D member 3
  • Synonyms
    FAM75D3
  • Links
    NCBI Gene ID: 389762
    neXtProt AC: NX_P0C874
    UniProt: P0C874

  • Chr Location
    9q21.32; chr9:81943500-81950094 (+)  GRCh38.p7
  • Human Ortholog
    SPATA31D4, SPATA31 subfamily D member 4
  • Synonyms
    FAM75D3, FAM75D4, SPATA31D3
  • Links
    NCBI Gene ID: 389761
    neXtProt AC: NX_Q6ZUB0
    UniProt: Q6ZUB0

  • Chr Location
    9q21.32; chr9:81928428-81934998 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 238683 NCBI Gene Model | MGI Sequence Detail 4947 C57BL/6J ±  kb
transcript NM_001083890 RefSeq | MGI Sequence Detail 3388 C57BL/6  
polypeptide NP_001077359 RefSeq | MGI Sequence Detail 853 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027970 Domain of unknown function DUF4599
    IPR039509 SPATA31/FAM205
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Phenotypes 7
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/09/2023
MGI 6.22 		The Jackson Laboratory