G430095P16Rik Gene Detail

Summary

• Symbol
  G430095P16Rik
• Name
  RIKEN cDNA G430095P16 gene

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3588227
  NCBI Gene: 619292
• Alliance
  genome feature page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr8:85449686-85453475 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 41.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  109 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3588227	protein coding gene	Chr8:85449593-85453478 (+)
129S1/SvImJ	ENSMUSG00200024025	protein coding gene	Chr8:79814917-79818756 (+)
A/J	ENSMUSG00195014383	protein coding gene	Chr8:80172975-80176814 (+)
AKR/J	ENSMUSG00220021805	protein coding gene	Chr8:80214475-80218314 (+)
BALB/cJ	ENSMUSG00180019043	protein coding gene	Chr8:80013609-80017448 (+)
C3H/HeJ	ENSMUSG00175010704	protein coding gene	Chr8:80108668-80112507 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0031307	protein coding gene	Chr8:76057859-76061925 (+)
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210020025	protein coding gene	Chr8:80095789-80099628 (+)
DBA/2J	ENSMUSG00185036594	protein coding gene	Chr8:86204380-86208219 (+)
FVB/NJ	ENSMUSG00205020045	protein coding gene	Chr8:79151610-79155449 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230028649	protein coding gene	Chr8:89811925-89815764 (+)
NOD/ShiLtJ	ENSMUSG00190026252	protein coding gene	Chr8:80169932-80173771 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  G430095P16Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  34 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  3
• Radiation induced
  1
• Genomic Mutations
  2 involving G430095P16Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1
• UniProt
  2

• Ensembl
  ENSMUSG00000074203 (Evidence)
• NCBI Gene
  619292

Representative Sequences			Length	Strain/Species
genomic	619292	NCBI Gene Model | MGI Sequence Detail	3790	C57BL/6J
transcript	NR_169084	RefSeq | MGI Sequence Detail	673	C57BL/6
polypeptide	Q3U2D5	UniProt | EBI | MGI Sequence Detail	148	Not Applicable

Protein
Information

• UniProt
  2 Sequences

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 43

  Phenotypes 34
• Earliest
  J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
• Latest
  J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12

TSS for G430095P16Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78441	Chr8:85448311-85448377 (+)	-1,342 bp
Tssr78442	Chr8:85449632-85449651 (+)	-44 bp
Tssr78443	Chr8:85449670-85449711 (+)	5 bp