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Rdh16f2 Gene Detail
Summary
  • Symbol
    Rdh16f2
  • Name
    RDH16 family member 2
  • Synonyms
    BC089597
  • Feature Type
    protein coding gene
  • IDs
    MGI:3583955
    NCBI Gene: 216454
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:127702345-127713188 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 76.39 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    378 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3583955
 protein coding gene Chr10:127702343-127713188 (+)
129S1/SvImJ ENSMUSG00200010143
 protein coding gene Chr10:124055467-124066331 (+)
A/J ENSMUSG00195013146
 protein coding gene Chr10:124518598-124529465 (+)
AKR/J ENSMUSG00220004405
 protein coding gene Chr10:124124124-124134993 (+)
BALB/cJ ENSMUSG00180009092
 protein coding gene Chr10:124509629-124520496 (+)
C3H/HeJ ENSMUSG00175005633
 protein coding gene Chr10:124508729-124519605 (+)
C57BL/6NJ ENSMUSG00215006871
 protein coding gene Chr10:124120675-124131520 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005035815
 protein coding gene Chr10:123489834-123500640 (+)
CBA/J ENSMUSG00210008314
 protein coding gene Chr10:124332935-124343808 (+)
DBA/2J ENSMUSG00185026139
 protein coding gene Chr10:124488057-124498901 (+)
FVB/NJ ENSMUSG00205013313
 protein coding gene Chr10:123729511-123740576 (+)
JF1/MsJ ENSUMUG00000042503
 protein coding gene Chr10:125780993-125791980 (+)
LP/J ENSMUSG00230029753
 protein coding gene Chr10:126409519-126420378 (+)
NOD/ShiLtJ ENSMUSG00190013412
 protein coding gene Chr10:124551698-124562541 (+)
NZO/HlLtJ ENSMUSG00225036332
 protein coding gene Chr10:130611938-130622997 (+)
PWK/PhJ ENSLUMG00010009441
 protein coding gene Chr10:124242186-124253097 (+)
SPRET/EiJ ENSMSPG00010027627
 protein coding gene Chr10:126192946-126202340 (+)
WSB/EiJ ENSIUOG00005008825
 protein coding gene Chr10:124126173-124137040 (+)



Homology
more
  • Human Ortholog
    RDH16, retinol dehydrogenase 16
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RDH16, retinol dehydrogenase 16
  • Synonyms
    hRDH-E, RODH-4, RODH4, SDR9C8
  • Links
    NCBI Gene ID: 8608
    UniProt: O75452

  • Chr Location
    12q13.3; chr12:56950087-56959374 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    643
  • Tissues
    45
  • cDNA Data
    26
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 216454 NCBI Gene Model | MGI Sequence Detail 10844 C57BL/6J ±  kb
transcript NM_145424 RefSeq | MGI Sequence Detail 1281 C57BL/6  
polypeptide NP_663399 RefSeq | MGI Sequence Detail 318 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR036291 NAD(P)-binding domain superfamily
    IPR020904 Short-chain dehydrogenase/reductase, conserved site
    IPR002347 Short-chain dehydrogenase/reductase SDR
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 2
References
more
  • Summaries
    All 25
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory