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Vax2os Gene Detail
Summary
  • Symbol
    Vax2os
  • Name
    ventral anterior homeobox 2, opposite strand
  • Synonyms
    Vax2os1, Vax2os2
Location &
Maps
more
  • Sequence Map
    Chr6:83669786-83689183 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 35.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    586 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3583301
 antisense lncRNA gene Chr6:83669786-83689190 (-)
129S1/SvImJ ENSMUSG00200012440
 lncRNA gene Chr6:80636886-80656323 (-)
A/J ENSMUSG00195012743
 lncRNA gene Chr6:80310773-80330216 (-)
AKR/J ENSMUSG00220001983
 lncRNA gene Chr6:79260646-79280099 (-)
BALB/cJ ENSMUSG00180010264
 lncRNA gene Chr6:80686804-80706243 (-)
C3H/HeJ ENSMUSG00175038637
 lncRNA gene Chr6:96698599-96717996 (+)
C57BL/6NJ ENSMUSG00215017037
 lncRNA gene Chr6:80689523-80708927 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003886
 antisense lncRNA gene Chr6:79859999-79878778 (-)
CAST/EiJ ENSTCUG00005008425
 lncRNA gene Chr6:80695913-80715167 (-)
CBA/J ENSMUSG00210011346
 lncRNA gene Chr6:80507837-80527244 (-)
DBA/2J ENSMUSG00185045594
 lncRNA gene Chr6:81054918-81074317 (-)
FVB/NJ ENSMUSG00205027269
 lncRNA gene Chr6:79728428-79747863 (-)
JF1/MsJ ENSUMUG00000021505
 lncRNA gene Chr6:80115586-80134876 (-)
LP/J ENSMUSG00230050754
 lncRNA gene Chr6:82194115-82213539 (-)
NOD/ShiLtJ ENSMUSG00190001789
 lncRNA gene Chr6:80131545-80150972 (-)
NZO/HlLtJ ENSMUSG00225020768
 lncRNA gene Chr6:84114245-84133541 (-)
PWK/PhJ ENSLUMG00010006313
 lncRNA gene Chr6:79462564-79481811 (-)
SPRET/EiJ ENSMSPG00010046081
 lncRNA gene Chr6:81591638-81610773 (-)
WSB/EiJ ENSIUOG00005019334
 lncRNA gene Chr6:81072801-81092230 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    5
  • Endonuclease-mediated
    1
  • Gene trapped
    3
  • Spontaneous
    1
  • Genomic Mutations
    2 involving Vax2os
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    667
  • Tissues
    25
  • cDNA Data
    3
  • Literature Summary
    3
Sequences &
Gene Models
less
  • All Sequences
    42
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 574519 NCBI Gene Model | MGI Sequence Detail 19398 C57BL/6J ±  kb
transcript NR_075094 RefSeq | MGI Sequence Detail 1863 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 9
    cDNA 3
    Primer pair 6

    Microarray probesets 1
Other
Accession IDs
less
MGI:3583303
References
more
  • Summaries
    All 23
    Developmental Gene Expression 3
    Phenotypes 9
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory