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Nlrp1c-ps Pseudogene Detail
Summary
  • Symbol
    Nlrp1c-ps
  • Name
    NLR family, pyrin domain containing 1C, pseudogene
  • Synonyms
    Nalp1c, OTTMUSG00000006090
  • Feature Type
    pseudogene
  • IDs
    MGI:3582962
    NCBI Gene: 627984
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:71133256-71172045 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 43.29 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    136 from dbSNP Build 142
  • Strain Annotations
    4
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3582962
 pseudogene Chr11:71133256-71176058 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0039790
 pseudogene Chr11:69096709-69140576 (-)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040327
 pseudogene Chr11:73992409-74035303 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0038770
 pseudogene Chr11:71163097-71205253 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000092528 Ensembl Gene Model | MGI Sequence Detail 38790 C57BL/6J ±  kb
transcript ENSMUST00000174668 Ensembl | MGI Sequence Detail 3422 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3649707
References
more
  • Summaries
    All 21
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:336980 Cohen H, et al., Post-phagocytosis activation of NLRP3 inflammasome by two novel T6SS effectors. Elife. 2022 Sep 26;11:e82766
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory