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AY512931 Gene Detail
Summary
  • Symbol
    AY512931
  • Name
    cDNA sequence AY512931
Location &
Maps
more
  • Sequence Map
    Chr8:45513739-45518455 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 24.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    343 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3525069
 lncRNA gene Chr8:45513739-45518455 (-)
129S1/SvImJ ENSMUSG00200006700
 lncRNA gene Chr8:40634669-40639392 (-)
A/J ENSMUSG00195004495
 lncRNA gene Chr8:41117578-41122303 (-)
AKR/J ENSMUSG00220004517
 lncRNA gene Chr8:40934288-40939014 (-)
BALB/cJ ENSMUSG00180002937
 lncRNA gene Chr8:40658837-40663561 (-)
C3H/HeJ ENSMUSG00175005319
 lncRNA gene Chr8:40786987-40791711 (-)
C57BL/6NJ ENSMUSG00215010723
 lncRNA gene Chr8:40589724-40594452 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005019762
 lncRNA gene Chr8:40645392-40648907 (-)
CBA/J ENSMUSG00210019322
 lncRNA gene Chr8:40676764-40681485 (-)
DBA/2J ENSMUSG00185006326
 lncRNA gene Chr8:46529479-46534201 (-)
FVB/NJ ENSMUSG00205002305
 lncRNA gene Chr8:39813682-39818405 (-)
JF1/MsJ ENSUMUG00000016120
 lncRNA gene Chr8:48220652-48224886 (-)
LP/J ENSMUSG00230018307
 lncRNA gene Chr8:50222487-50227209 (-)
NOD/ShiLtJ ENSMUSG00190006126
 lncRNA gene Chr8:40702617-40707342 (-)
NZO/HlLtJ ENSMUSG00225011870
 lncRNA gene Chr8:53824986-53829712 (-)
PWK/PhJ ENSLUMG00010009527
 lncRNA gene Chr8:40472632-40476884 (-)
SPRET/EiJ ENSMSPG00010006210
 lncRNA gene Chr8:41352457-41356609 (-)
WSB/EiJ ENSIUOG00005002546
 lncRNA gene Chr8:41542102-41546327 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 434310 NCBI Gene Model | MGI Sequence Detail 4717 C57BL/6J ±  kb
transcript NR_033588 RefSeq | MGI Sequence Detail 2395 C57BL/6  
polypeptide Q6R5F1 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:87784 Sharov AA, et al., Transcriptome Analysis of Mouse Stem Cells and Early Embryos. PLoS Biol. 2003 Dec;1(3):E74
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory