Snhg7os Gene Detail

Summary

• Symbol
  Snhg7os
• Name
  small nucleolar RNA host gene 7, opposite strand
• Synonyms
  5730588L14Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3045374
  NCBI Gene: 329369
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:26532133-26535956 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 18.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  240 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3045374	antisense lncRNA gene	Chr2:26530010-26542132 (+)
129S1/SvImJ	ENSMUSG00200053501	lncRNA gene	Chr2:23509599-23515159 (+)
A/J	ENSMUSG00195049882	lncRNA gene	Chr2:23598741-23604294 (+)
AKR/J	ENSMUSG00220053714	lncRNA gene	Chr2:23716512-23722067 (+)
BALB/cJ	ENSMUSG00180054501	lncRNA gene	Chr2:23611100-23616664 (+)
C3H/HeJ	ENSMUSG00175053787	lncRNA gene	Chr2:23580491-23586055 (+)
C57BL/6NJ	ENSMUSG00215049064	lncRNA gene	Chr2:23639218-23644786 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003144	antisense lncRNA gene	Chr2:22537661-22542273 (+)
CAST/EiJ	ENSTCUG00005053499	lncRNA gene	Chr2:23347725-23353265 (+)
CBA/J	ENSMUSG00210018049	lncRNA gene	Chr2:23614151-23619715 (+)
DBA/2J	ENSMUSG00185053642	lncRNA gene	Chr2:23512841-23518396 (+)
FVB/NJ	ENSMUSG00205050722	lncRNA gene	Chr2:23368014-23373580 (+)
JF1/MsJ	ENSUMUG00000056384	lncRNA gene	Chr2:23427321-23430905 (+)
LP/J	ENSMUSG00230045700	lncRNA gene	Chr2:25445560-25451120 (+)
NOD/ShiLtJ	ENSMUSG00190053621	lncRNA gene	Chr2:23604518-23610074 (+)
NZO/HlLtJ	ENSMUSG00225011155	lncRNA gene	Chr2:33183179-33188747 (+)
PWK/PhJ	ENSLUMG00010053124	lncRNA gene	Chr2:23511729-23517336 (+)
SPRET/EiJ	ENSMSPG00010046084	lncRNA gene	Chr2:24205604-24211202 (+)
WSB/EiJ	ENSIUOG00005052944	lncRNA gene	Chr2:23469646-23475199 (+)

Homology

• Gene Tree
  Snhg7os
  

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  59
• RefSeq
  4

• Ensembl
  ENSMUSG00000086775 (Evidence)
• NCBI Gene
  329369

Representative Sequences			Length	Strain/Species
genomic	329369	NCBI Gene Model | MGI Sequence Detail	3824	C57BL/6J
transcript	AK030770	GenBank | ENA | DDBJ | MGI Sequence Detail	3946	C57BL/6J

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 11
• Earliest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582