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Ccdc142 Gene Detail
Summary
  • Symbol
    Ccdc142
  • Name
    coiled-coil domain containing 142
  • Synonyms
    A230058J24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045292
    NCBI Gene: 243510
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:83078582-83085375 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 35.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    203 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045292
 protein coding gene Chr6:83078497-83086102 (+)
129S1/SvImJ ENSMUSG00200010521
 protein coding gene Chr6:80048030-80054848 (+)
A/J ENSMUSG00195011326
 protein coding gene Chr6:79725005-79731790 (+)
AKR/J ENSMUSG00220001875
 protein coding gene Chr6:78668404-78675189 (+)
BALB/cJ ENSMUSG00180008966
 protein coding gene Chr6:80101019-80107796 (+)
C3H/HeJ ENSMUSG00175032818
 protein coding gene Chr6:97302551-97309346 (-)
C57BL/6NJ ENSMUSG00215007563
 protein coding gene Chr6:80098174-80104967 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028542
 protein coding gene Chr6:79251746-79258149 (+)
CAST/EiJ ENSTCUG00005008201
 protein coding gene Chr6:80111338-80118134 (+)
CBA/J ENSMUSG00210010470
 protein coding gene Chr6:79916546-79923339 (+)
DBA/2J ENSMUSG00185000891
 protein coding gene Chr6:80463608-80470401 (+)
FVB/NJ ENSMUSG00205021312
 protein coding gene Chr6:79142702-79149483 (+)
JF1/MsJ ENSUMUG00000016723
 protein coding gene Chr6:79516955-79523823 (+)
LP/J ENSMUSG00230049193
 protein coding gene Chr6:81605282-81612100 (+)
NOD/ShiLtJ ENSMUSG00190001157
 protein coding gene Chr6:79545824-79552603 (+)
NZO/HlLtJ ENSMUSG00225017034
 protein coding gene Chr6:83513533-83520401 (+)
PWK/PhJ ENSLUMG00010005912
 protein coding gene Chr6:78867808-78874700 (+)
SPRET/EiJ ENSMSPG00010033505
 protein coding gene Chr6:81022072-81028471 (+)
WSB/EiJ ENSIUOG00005017463
 protein coding gene Chr6:80483570-80490351 (+)



Homology
more
  • Human Ortholog
    CCDC142, coiled-coil domain containing 142
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC142, coiled-coil domain containing 142
  • Links
    NCBI Gene ID: 84865
    UniProt: Q17RM4

  • Chr Location
    2p13.1; chr2:74471986-74483408 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107499 Ensembl Gene Model | MGI Sequence Detail 6794 C57BL/6J ±  kb
transcript ENSMUST00000101254 Ensembl | MGI Sequence Detail 2317 Not Applicable  
polypeptide ENSMUSP00000098812 Ensembl | MGI Sequence Detail 738 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 23
    Phenotypes 9
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:386463 Rias E, et al., Protocol for isolation of total RNA from mouse whole cochlea using organic solvents. STAR Protoc. 2026 Mar 20;7(1):104376
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory