F730035M05Rik MGI Mouse Gene Detail - MGI:3041236

Sequence Map

Chr12:70274615-70280939 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3041236	lncRNA gene	Chr12:70274615-70280939 (+)
129S1/SvImJ	ENSMUSG00200032730	lncRNA gene	Chr12:62194398-62200722 (+)
A/J	ENSMUSG00195015356	lncRNA gene	Chr12:64890010-64896318 (+)
AKR/J	ENSMUSG00220015470	lncRNA gene	Chr12:62692451-62698783 (+)
BALB/cJ	ENSMUSG00180036655	lncRNA gene	Chr12:63889089-63895403 (+)
C3H/HeJ	ENSMUSG00175030977	lncRNA gene	Chr12:66983457-66989761 (+)
C57BL/6NJ	ENSMUSG00215030925	lncRNA gene	Chr12:63263760-63270087 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004870	lincRNA gene	Chr12:64887690-64893665 (+)
CAST/EiJ	ENSTCUG00005036761	lncRNA gene	Chr12:63219189-63225445 (+)
CBA/J	ENSMUSG00210031839	lncRNA gene	Chr12:63453463-63459770 (+)
DBA/2J	ENSMUSG00185004829	lncRNA gene	Chr12:65352838-65359137 (+)
FVB/NJ	ENSMUSG00205032166	lncRNA gene	Chr12:63094962-63101268 (+)
JF1/MsJ	ENSUMUG00000028491	lncRNA gene	Chr12:69313027-69319366 (+)
LP/J	ENSMUSG00230022809	lncRNA gene	Chr12:72320066-72326392 (+)
NOD/ShiLtJ	ENSMUSG00190012980	lncRNA gene	Chr12:62508834-62515162 (+)
NZO/HlLtJ	ENSMUSG00225038447	lncRNA gene	Chr12:74396412-74402733 (+)
PWK/PhJ	ENSLUMG00010033912	lncRNA gene	Chr12:63385180-63391511 (+)
SPRET/EiJ	ENSMSPG00010031558	lncRNA gene	Chr12:65067326-65074415 (+)
WSB/EiJ	ENSIUOG00005012863	lncRNA gene	Chr12:63147355-63153692 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	414124	NCBI Gene Model \| MGI Sequence Detail	6325	C57BL/6J	± kb
	transcript	NR_045174	RefSeq \| MGI Sequence Detail	1296	C57BL/6

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Summaries

All 11

Phenotypes 2
Earliest

J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

TSS for F730035M05Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr113678	Chr12:70280638-70280672 (+)	6,040 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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