C230096K16Rik Gene Detail

Summary

• Symbol
  C230096K16Rik
• Name
  RIKEN cDNA C230096K16 gene

• Feature Type
  protein coding gene
• IDs
  MGI:3041194
  NCBI Gene: 414098
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:64961357-64963078 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3041194	protein coding gene	Chr5:64961357-64963078 (+)
129S1/SvImJ	ENSMUSG00200000227	unclassified gene	Chr5:60577726-60579447 (+)
A/J	ENSMUSG00195000446	unclassified gene	Chr5:59946483-59948197 (+)
AKR/J	ENSMUSG00220007090	unclassified gene	Chr5:60083618-60085332 (+)
BALB/cJ	ENSMUSG00180006651	unclassified gene	Chr5:59732305-59734026 (+)
C3H/HeJ	ENSMUSG00175029721	unclassified gene	Chr5:61758977-61760698 (+)
C57BL/6NJ	ENSMUSG00215002881	unclassified gene	Chr5:60506593-60508314 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001345	unclassified gene	Chr5:58104849-58106591 (+)
CAST/EiJ	ENSTCUG00005000455	unclassified gene	Chr5:59666729-59668452 (+)
CBA/J	ENSMUSG00210023578	unclassified gene	Chr5:60671930-60673651 (+)
DBA/2J	ENSMUSG00185005911	unclassified gene	Chr5:62529405-62531126 (+)
FVB/NJ	ENSMUSG00205011177	unclassified gene	Chr5:59484342-59486055 (+)
JF1/MsJ	ENSUMUG00000023040	unclassified gene	Chr5:66999474-67001194 (+)
LP/J	ENSMUSG00230008882	unclassified gene	Chr5:67190525-67192246 (+)
NOD/ShiLtJ	ENSMUSG00190000433	unclassified gene	Chr5:59671650-59673364 (+)
NZO/HlLtJ	ENSMUSG00225010532	unclassified gene	Chr5:72316664-72318375 (+)
PWK/PhJ	ENSLUMG00010004429	unclassified gene	Chr5:59626112-59627832 (+)
SPRET/EiJ	ENSMSPG00010035526	unclassified gene	Chr5:61431493-61433211 (+)
WSB/EiJ	ENSIUOG00005018779	unclassified gene	Chr5:62635357-62637077 (+)

Homology

• Gene Tree
  C230096K16Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  17 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Spontaneous
  1
• Genomic Mutations
  4 involving C230096K16Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  24

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000106205 (Evidence)
• NCBI Gene
  414098

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106205	Ensembl Gene Model | MGI Sequence Detail	1722	C57BL/6J
transcript	AK049070	GenBank | ENA | DDBJ | MGI Sequence Detail	1722	C57BL/6J
polypeptide	Q8C7X1	UniProt | EBI | MGI Sequence Detail	152	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 24

  cDNA 24

References

• Summaries
  All 26

  Phenotypes 17
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707