B130034C11Rik Gene Detail

Summary

• Symbol
  B130034C11Rik
• Name
  RIKEN cDNA B130034C11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3041186
  NCBI Gene: 414095
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:87292961-87300926 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 49.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  417 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3041186	lncRNA gene	Chr16:87292095-87309977 (+)
129S1/SvImJ	ENSMUSG00200037897	lncRNA gene	Chr16:84156924-84174093 (+)
A/J	ENSMUSG00195029126	lncRNA gene	Chr16:83959089-83983044 (+)
AKR/J	ENSMUSG00220016399	lncRNA gene	Chr16:84160096-84177273 (+)
BALB/cJ	ENSMUSG00180015119	lncRNA gene	Chr16:84040762-84057942 (+)
C3H/HeJ	ENSMUSG00175016068	lncRNA gene	Chr16:84366743-84390700 (+)
C57BL/6NJ	ENSMUSG00215034266	lncRNA gene	Chr16:84173037-84190185 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013459	unclassified non-coding RNA gene	Chr16:82003665-82010891 (+)
CAST/EiJ	ENSTCUG00005021213	lncRNA gene	Chr16:83732939-83748617 (+)
CBA/J	ENSMUSG00210041509	lncRNA gene	Chr16:84266610-84283788 (+)
DBA/2J	ENSMUSG00185034216	lncRNA gene	Chr16:84219611-84236788 (+)
FVB/NJ	ENSMUSG00205024787	lncRNA gene	Chr16:84010249-84034204 (+)
JF1/MsJ	ENSUMUG00000042525	lncRNA gene	Chr16:84312758-84354386 (+)
LP/J	ENSMUSG00230036212	lncRNA gene	Chr16:86717991-86735160 (+)
NOD/ShiLtJ	ENSMUSG00190029271	lncRNA gene	Chr16:84175926-84199883 (+)
NZO/HlLtJ	ENSMUSG00225031335	lncRNA gene	Chr16:89897132-89914310 (+)
PWK/PhJ	ENSLUMG00010014448	lncRNA gene	Chr16:83970997-83987636 (+)
SPRET/EiJ	ENSMSPG00010032813	lncRNA gene	Chr16:85086284-85101798 (+)
WSB/EiJ	ENSIUOG00005022329	lncRNA gene	Chr16:84166443-84183131 (+)

Homology

• Gene Tree
  B130034C11Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  11 phenotype references
  

• All Mutations and Alleles
  33
• Gene trapped
  30
• Targeted
  2
• Genomic Mutations
  3 involving B130034C11Rik
• Find Mice (IMSR)
  8 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  9

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  44
• RefSeq
  1

• Ensembl
  ENSMUSG00000093606 (Evidence)
• NCBI Gene
  414095

Representative Sequences			Length	Strain/Species
genomic	414095	NCBI Gene Model | MGI Sequence Detail	7966	C57BL/6J
transcript	NR_040375	RefSeq | MGI Sequence Detail	1406	C57BL/6

Molecular
Reagents

• All nucleic 9

  cDNA 9

References

• Summaries
  All 20

  Phenotypes 11
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:361105 Tateossian H, et al., DYRK1A kinase triplication is the major cause of Otitis Media in Down Syndrome. Elife. 2025;

TSS for B130034C11Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr139221	Chr16:87292871-87292950 (+)	-50 bp